Gašić, Katarina

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Authority KeyName Variants
orcid::0000-0002-2280-4582
  • Gašić, Katarina (70)
Projects
Development of integrated management of harmful organisms in plant production in order to overcome resistance and to improve food quality and safety Ministry of Education, Science and Technological Development, Republic of Serbia, Grant no. 451-03-68/2020-14/200010 (Institute for Plant Protection and Environment, Belgrade)
Ministry of Education, Science and Technological Development, Republic of Serbia, Grant no. 451-03-68/2020-14/200116 (University of Belgrade, Faculty of Agriculture) Development of integrated approach in plant protection for control harmful organisms
Advancing research in agricultural and food sciences at Faculty of Agriculture, University of Belgrade Development of vegetable cultivars and hybrids intended for outdoor and indoor production
COST Action - 873 COST Action 873
COST Action 873 - European Cooperation in Science and Technology COST Action CA16107 EuroXanth.
Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)—Project Number 429677233 Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Projektnummer 429677233
Molecular characterization of bacteria from genera Bacillus and Pseudomonas as potential agents for biological control Characterization and application of fungal metabolites and assessment of new biofungicides potential
Ministry of Education, Science and Technological Development, Republic of Serbia, Grant no. 451-03-68/2020-14/200042 (University of Belgrade, Institute of Molecular Genetics and Genetic Engineering) Geohemijska ispitivanja u funkciji pronalaženja novih ležišta fosilnih goriva i zaštite životne sredine
Stvaranje sorti i hibrida povrća za proizvodnju u zaštićenom prostoru Integrating biotechnology approach in breeding vegetable crops for sustainable agricultural systems
MICROS - Insights Into the Microbiome of Crown Gall Tumors on Different Plants in Serbia Ministry of Education, Science and Technological Development, Republic of Serbia
Ministry of Science and Ministry of Agriculture and Rural Development of Montenegro Ministry of Science and Ministry of Agriculture and Rural Development of Montenegro as part of the 2012-2015 National Research Project Serological and Molecular Characterization ofErwinia amylovora Strains
National Institute of Food and Agriculture, U.S. Department of Agriculture, Hatch/Multistate Research Program projects NYG-625835 and NYG-625857 under 1009897 and 1014444 National Science Center, Poland - DEC-2013/08/M/NZ9/00138
NY State Farm Viability Institute grant number 81927/A001-FVI 17 006 NY State Specialty Crop Block Grant Program grant number SCG 82535/A001-SCG 17 005 to SGA
Polish Ministry of Science and Higher Education - 118/N-COST/2008/0 Projekat Ministarstva nauke Republike Srbije, br. 20051: Optimizacija primene hemijskih sredstava u zaštiti bilja povećanjem efikasnosti dijagnostičkih metoda i procene rizika pojave bolesti, štetočina i korova
Proučavanje populacije i biološka kontrola Xanthomonas arboricola pv. pruni u zasadima breskve

Author's Bibliography

Populacija bakterija u bakterioznim tumorima koštičavog voća u Srbiji

Zlatković, Nevena; Kuzmanović, Nemanja; Kuzmanović, Slobodan; Gašić, Katarina

(Društvo za zaštitu bilja Srbije, 2023)

TY  - CONF
AU  - Zlatković, Nevena
AU  - Kuzmanović, Nemanja
AU  - Kuzmanović, Slobodan
AU  - Gašić, Katarina
PY  - 2023
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/1213
AB  - Proizvodnja koštičavog voća zauzima značajno mesto u voćarstvu Srbije.
Tradicionalno, najviše se gaji šljiva sa sve raznovrsnijim sortimentom u poslednjih desetak
godina, dok je proizvodnja trešnje, višnje i kajsije sve više zastupljena u pojedinim regionima
zemlje, nekoliko decenija unazad. Prema podacima FAO za 2021. godinu, prinos šljive bio je
oko 40.000 t, a trešanja i višanja oko 15.000 t. Iste godine, proizvedeno je oko 30.000 t kajsije.
Uspešnu proizvodnju često ometa pojava različitih biljnih bolesti.
Od bakterioznih oboljenja, bakteriozni rak korena i korenovog različitih gajenih vrsta
zauzima značajno mesto. S obzirom da je utvđeno da bakteriozne tumore osim tumorogenih,
naseljavaju i druge vrste bakterija, deo istraživanja posvećen je izučavanju sastava populacije
mikroorganizama tumora.
Tokom 2020. i 2021. godine na području Srbije, prikupljeni su uzorci šljive, trešnje,
višnje i kajsije sa izraženim simptomima bakterioznog raka. Primenom savremene metode
sekvenciranja umnoženih produkata regiona V3-V4 16S rRNK gena, dobijene su amplikonske sekvence (ASV), koje su dalje obrađene. Na taj način, determinisane su najzastupljenije vrste
bakterija u testiranim uzorcima.
Patogena vrsta R. tumorigenes detektovana je kod trećine od ukupnog broja testiranih
uzoraka. U uzorcima u kojima je prisutna, njena relativna zastupljenost iznosi do ~ 4%.
Rhizobium spp. prisutan je do ~ 11% u uzorcima šljive, odnosno ~ 6% u uzorcima kajsije i ~
5% trešnje i višnje. Vrste roda Bacillus detektovane su u svim testiranim tumorima, sa udelom
i do ~ 53% kod uzoraka šljive. U tumorima na trešnji i višnji, prisutne su vrste roda Rachnella
u koncentraciji do ~ 23%, kao i Cutibacterium do ~ 14%. Vrste roda Pseuodmonas
detektovane su u uzrocima tumora na kajsiji (do ~4%). Osim navedenih, u uzorcima su
prisutni i drugi taksoni u nižim koncentracijama.
Predstavljeni rezultati su deo projekta koji se sprovodi u cilju boljeg razumevanja
odnosa između patogenih i nepatogenih vrsta u zajednici mikroorganizama tumora. Imajući u
vidu sve veći značaj pojave bakterioznog raka u različitim zasadima širom sveta, kao i
potencjalni benefit mikroorganizama koji naseljavaju tumore u biološkoj kontroli i opštem
stanju biljke domaćina, istraživanja na ovu temu će biti od značaja i u narednom periodu.
PB  - Društvo za zaštitu bilja Srbije
C3  - XVII Simpozijum o zaštiti bilja, Zbornik rezimea radova, Zlatibor, 27-30. novembar 2023
T1  - Populacija bakterija u bakterioznim tumorima koštičavog voća u Srbiji
EP  - 55
SP  - 54
ER  - 
@conference{
author = "Zlatković, Nevena and Kuzmanović, Nemanja and Kuzmanović, Slobodan and Gašić, Katarina",
year = "2023",
abstract = "Proizvodnja koštičavog voća zauzima značajno mesto u voćarstvu Srbije.
Tradicionalno, najviše se gaji šljiva sa sve raznovrsnijim sortimentom u poslednjih desetak
godina, dok je proizvodnja trešnje, višnje i kajsije sve više zastupljena u pojedinim regionima
zemlje, nekoliko decenija unazad. Prema podacima FAO za 2021. godinu, prinos šljive bio je
oko 40.000 t, a trešanja i višanja oko 15.000 t. Iste godine, proizvedeno je oko 30.000 t kajsije.
Uspešnu proizvodnju često ometa pojava različitih biljnih bolesti.
Od bakterioznih oboljenja, bakteriozni rak korena i korenovog različitih gajenih vrsta
zauzima značajno mesto. S obzirom da je utvđeno da bakteriozne tumore osim tumorogenih,
naseljavaju i druge vrste bakterija, deo istraživanja posvećen je izučavanju sastava populacije
mikroorganizama tumora.
Tokom 2020. i 2021. godine na području Srbije, prikupljeni su uzorci šljive, trešnje,
višnje i kajsije sa izraženim simptomima bakterioznog raka. Primenom savremene metode
sekvenciranja umnoženih produkata regiona V3-V4 16S rRNK gena, dobijene su amplikonske sekvence (ASV), koje su dalje obrađene. Na taj način, determinisane su najzastupljenije vrste
bakterija u testiranim uzorcima.
Patogena vrsta R. tumorigenes detektovana je kod trećine od ukupnog broja testiranih
uzoraka. U uzorcima u kojima je prisutna, njena relativna zastupljenost iznosi do ~ 4%.
Rhizobium spp. prisutan je do ~ 11% u uzorcima šljive, odnosno ~ 6% u uzorcima kajsije i ~
5% trešnje i višnje. Vrste roda Bacillus detektovane su u svim testiranim tumorima, sa udelom
i do ~ 53% kod uzoraka šljive. U tumorima na trešnji i višnji, prisutne su vrste roda Rachnella
u koncentraciji do ~ 23%, kao i Cutibacterium do ~ 14%. Vrste roda Pseuodmonas
detektovane su u uzrocima tumora na kajsiji (do ~4%). Osim navedenih, u uzorcima su
prisutni i drugi taksoni u nižim koncentracijama.
Predstavljeni rezultati su deo projekta koji se sprovodi u cilju boljeg razumevanja
odnosa između patogenih i nepatogenih vrsta u zajednici mikroorganizama tumora. Imajući u
vidu sve veći značaj pojave bakterioznog raka u različitim zasadima širom sveta, kao i
potencjalni benefit mikroorganizama koji naseljavaju tumore u biološkoj kontroli i opštem
stanju biljke domaćina, istraživanja na ovu temu će biti od značaja i u narednom periodu.",
publisher = "Društvo za zaštitu bilja Srbije",
journal = "XVII Simpozijum o zaštiti bilja, Zbornik rezimea radova, Zlatibor, 27-30. novembar 2023",
title = "Populacija bakterija u bakterioznim tumorima koštičavog voća u Srbiji",
pages = "55-54"
}
Zlatković, N., Kuzmanović, N., Kuzmanović, S.,& Gašić, K.. (2023). Populacija bakterija u bakterioznim tumorima koštičavog voća u Srbiji. in XVII Simpozijum o zaštiti bilja, Zbornik rezimea radova, Zlatibor, 27-30. novembar 2023
Društvo za zaštitu bilja Srbije., 54-55.
Zlatković N, Kuzmanović N, Kuzmanović S, Gašić K. Populacija bakterija u bakterioznim tumorima koštičavog voća u Srbiji. in XVII Simpozijum o zaštiti bilja, Zbornik rezimea radova, Zlatibor, 27-30. novembar 2023. 2023;:54-55..
Zlatković, Nevena, Kuzmanović, Nemanja, Kuzmanović, Slobodan, Gašić, Katarina, "Populacija bakterija u bakterioznim tumorima koštičavog voća u Srbiji" in XVII Simpozijum o zaštiti bilja, Zbornik rezimea radova, Zlatibor, 27-30. novembar 2023 (2023):54-55.

Characterization of Pseudomonas syringae Strains Associated with Shoot Blight of Raspberry and Blackberry in Serbia

Ivanović, Milan; Prokić, Anđelka; Gašić, Katarina; Menković, Jelena; Kuzmanović, Nemanja; Zlatković, Nevena; Obradović, Aleksa

(APS Publications, 2023)

TY  - JOUR
AU  - Ivanović, Milan
AU  - Prokić, Anđelka
AU  - Gašić, Katarina
AU  - Menković, Jelena
AU  - Kuzmanović, Nemanja
AU  - Zlatković, Nevena
AU  - Obradović, Aleksa
PY  - 2023
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/715
AB  - During May 2016, severe blight symptoms were observed in several raspberry and blackberry fields in Serbia. In total, 22 strains were isolated: 16 from symptomatic raspberry shoots, 2 from asymptomatic raspberry leaves, and 4 from symptomatic blackberry shoots. Additionally, eight raspberry strains, isolated earlier from two similar outbreaks, were included in the study. Pathogenicity of the strains was confirmed on detached raspberry and blackberry shoots by reproducing the symptoms of natural infection. The strains were Gram-negative, fluorescent on King’s medium B, ice nucleation positive, and utilized glucose oxidatively. All strains were levan positive, oxidase negative, nonpectolytic, arginine dihydrolase negative, and induced hypersensitivity in tobacco leaves (LOPAT + −−− +, Pseudomonas group Ia). Furthermore, all strains liquefied gelatin and hydrolyzed aesculin but did not show tyrosinase activity or utilize tartrate (GATTa + + − −). Tentative identification using morphology, LOPAT, GATTa, and ice-nucleating ability tests suggested that isolated strains belong to Pseudomonas syringae. The syrB gene associated with syringomycin production was detected in all strains. DNA fingerprints with REP, ERIC, and BOX primers generated identical profiles for 29 strains, except for strain KBI 222, which showed a unique genomic fingerprint. In all, 9 of 10 selected strains exhibited identical sequences of four housekeeping genes: gyrB, rpoD, gapA, and gltA. Five nucleotide polymorphisms were found in strain KBI 222 at the rpoD gene locus only. In the phylogenetic tree based on a concatenated sequence of all four housekeeping genes, strains clustered within phylogroup 2 (i.e., genomospecies 1) of the P. syringae species complex, with pathotype strains of P. syringae pv. aceris and P. syringae pv. solidagae as their closest relatives. There was no correlation between genotype and geographic origin, particular outbreak, host, or cultivar.
PB  - APS Publications
T2  - PLANT DISEASE
T1  - Characterization of Pseudomonas syringae Strains Associated with Shoot Blight of Raspberry and Blackberry in Serbia
IS  - 3
VL  - 107
DO  - 10.1094/PDIS-06-22-1425-RE
ER  - 
@article{
author = "Ivanović, Milan and Prokić, Anđelka and Gašić, Katarina and Menković, Jelena and Kuzmanović, Nemanja and Zlatković, Nevena and Obradović, Aleksa",
year = "2023",
abstract = "During May 2016, severe blight symptoms were observed in several raspberry and blackberry fields in Serbia. In total, 22 strains were isolated: 16 from symptomatic raspberry shoots, 2 from asymptomatic raspberry leaves, and 4 from symptomatic blackberry shoots. Additionally, eight raspberry strains, isolated earlier from two similar outbreaks, were included in the study. Pathogenicity of the strains was confirmed on detached raspberry and blackberry shoots by reproducing the symptoms of natural infection. The strains were Gram-negative, fluorescent on King’s medium B, ice nucleation positive, and utilized glucose oxidatively. All strains were levan positive, oxidase negative, nonpectolytic, arginine dihydrolase negative, and induced hypersensitivity in tobacco leaves (LOPAT + −−− +, Pseudomonas group Ia). Furthermore, all strains liquefied gelatin and hydrolyzed aesculin but did not show tyrosinase activity or utilize tartrate (GATTa + + − −). Tentative identification using morphology, LOPAT, GATTa, and ice-nucleating ability tests suggested that isolated strains belong to Pseudomonas syringae. The syrB gene associated with syringomycin production was detected in all strains. DNA fingerprints with REP, ERIC, and BOX primers generated identical profiles for 29 strains, except for strain KBI 222, which showed a unique genomic fingerprint. In all, 9 of 10 selected strains exhibited identical sequences of four housekeeping genes: gyrB, rpoD, gapA, and gltA. Five nucleotide polymorphisms were found in strain KBI 222 at the rpoD gene locus only. In the phylogenetic tree based on a concatenated sequence of all four housekeeping genes, strains clustered within phylogroup 2 (i.e., genomospecies 1) of the P. syringae species complex, with pathotype strains of P. syringae pv. aceris and P. syringae pv. solidagae as their closest relatives. There was no correlation between genotype and geographic origin, particular outbreak, host, or cultivar.",
publisher = "APS Publications",
journal = "PLANT DISEASE",
title = "Characterization of Pseudomonas syringae Strains Associated with Shoot Blight of Raspberry and Blackberry in Serbia",
number = "3",
volume = "107",
doi = "10.1094/PDIS-06-22-1425-RE"
}
Ivanović, M., Prokić, A., Gašić, K., Menković, J., Kuzmanović, N., Zlatković, N.,& Obradović, A.. (2023). Characterization of Pseudomonas syringae Strains Associated with Shoot Blight of Raspberry and Blackberry in Serbia. in PLANT DISEASE
APS Publications., 107(3).
https://doi.org/10.1094/PDIS-06-22-1425-RE
Ivanović M, Prokić A, Gašić K, Menković J, Kuzmanović N, Zlatković N, Obradović A. Characterization of Pseudomonas syringae Strains Associated with Shoot Blight of Raspberry and Blackberry in Serbia. in PLANT DISEASE. 2023;107(3).
doi:10.1094/PDIS-06-22-1425-RE .
Ivanović, Milan, Prokić, Anđelka, Gašić, Katarina, Menković, Jelena, Kuzmanović, Nemanja, Zlatković, Nevena, Obradović, Aleksa, "Characterization of Pseudomonas syringae Strains Associated with Shoot Blight of Raspberry and Blackberry in Serbia" in PLANT DISEASE, 107, no. 3 (2023),
https://doi.org/10.1094/PDIS-06-22-1425-RE . .
2
1
1

First report of bacterial canker on blueberry (Vaccinium corymbosum) caused by Pseudomonas syringae pv. syringae in Serbia

Zlatković, Nevena; Aleksic, Goran; Gašić, Katarina

(American Phytopathological Society, 2022)


                                            

                                            
Zlatković, N., Aleksic, G.,& Gašić, K.. (2022). First report of bacterial canker on blueberry (Vaccinium corymbosum) caused by Pseudomonas syringae pv. syringae in Serbia. in Plant Disease
American Phytopathological Society., 106(3), 1057-1057.
https://doi.org/10.1094/PDIS-07-21-1395-PDN
Zlatković N, Aleksic G, Gašić K. First report of bacterial canker on blueberry (Vaccinium corymbosum) caused by Pseudomonas syringae pv. syringae in Serbia. in Plant Disease. 2022;106(3):1057-1057.
doi:10.1094/PDIS-07-21-1395-PDN .
Zlatković, Nevena, Aleksic, Goran, Gašić, Katarina, "First report of bacterial canker on blueberry (Vaccinium corymbosum) caused by Pseudomonas syringae pv. syringae in Serbia" in Plant Disease, 106, no. 3 (2022):1057-1057,
https://doi.org/10.1094/PDIS-07-21-1395-PDN . .
2
2
2

Polyphasic Characterization of Acidovorax citrulli Strains Originating from Serbia

Zlatković, Nevena; Gašić, Katarina; Kuzmanović, Nemanja; Prokić, Anđelka; Ivanović, Milan; Zivkovic, Svetlana; Obradović, Aleksa

(MDPI, 2022)

TY  - JOUR
AU  - Zlatković, Nevena
AU  - Gašić, Katarina
AU  - Kuzmanović, Nemanja
AU  - Prokić, Anđelka
AU  - Ivanović, Milan
AU  - Zivkovic, Svetlana
AU  - Obradović, Aleksa
PY  - 2022
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/744
AB  - Acidovorax citrulli, the causal agent of bacterial fruit blotch (BFB), is an economically
important pathogen of watermelon and related plant species worldwide. In the period 2014–2018,
several outbreaks of BFB were observed in major watermelon production regions in Serbia. A total of
43 strains, isolated from symptomatic watermelon tissue, were analyzed by biochemical, pathogenic
and molecular tests. Based on the phenotypic characteristics, PCR assay, and 16S rRNA gene
sequence analysis, all strains were identified as A. citrulli. A multilocus sequence analysis of the four
housekeeping (adk, gyrB, pilT and gltA) and three virulence genes (Aave_1548, avrRx01 and luxR)
revealed that studied A. citrulli strains represent the homogeneous population and they clustered
together with group II reference strain AAC00-1. Strain affiliation to group II was confirmed by PCR
based on the putative type III secretion effector gene and by duplex PCR test. High homogeneity
of studied strains was also confirmed by BOX-PCR. Differences were observed for two strains in
their pathogenicity as well as susceptibility to copper compounds. Moreover, six major watermelon
varieties grown in Serbia showed high sensitivity to the pathogen, while cross inoculation assay
revealed that the strains were able to infect other species within the Cucurbitaceae family.
PB  - MDPI
T2  - Agronomy
T1  - Polyphasic Characterization of Acidovorax citrulli Strains Originating from Serbia
SP  - 235
VL  - 12
VL  - 2
DO  - 10.3390/agronomy12020235
ER  - 
@article{
author = "Zlatković, Nevena and Gašić, Katarina and Kuzmanović, Nemanja and Prokić, Anđelka and Ivanović, Milan and Zivkovic, Svetlana and Obradović, Aleksa",
year = "2022",
abstract = "Acidovorax citrulli, the causal agent of bacterial fruit blotch (BFB), is an economically
important pathogen of watermelon and related plant species worldwide. In the period 2014–2018,
several outbreaks of BFB were observed in major watermelon production regions in Serbia. A total of
43 strains, isolated from symptomatic watermelon tissue, were analyzed by biochemical, pathogenic
and molecular tests. Based on the phenotypic characteristics, PCR assay, and 16S rRNA gene
sequence analysis, all strains were identified as A. citrulli. A multilocus sequence analysis of the four
housekeeping (adk, gyrB, pilT and gltA) and three virulence genes (Aave_1548, avrRx01 and luxR)
revealed that studied A. citrulli strains represent the homogeneous population and they clustered
together with group II reference strain AAC00-1. Strain affiliation to group II was confirmed by PCR
based on the putative type III secretion effector gene and by duplex PCR test. High homogeneity
of studied strains was also confirmed by BOX-PCR. Differences were observed for two strains in
their pathogenicity as well as susceptibility to copper compounds. Moreover, six major watermelon
varieties grown in Serbia showed high sensitivity to the pathogen, while cross inoculation assay
revealed that the strains were able to infect other species within the Cucurbitaceae family.",
publisher = "MDPI",
journal = "Agronomy",
title = "Polyphasic Characterization of Acidovorax citrulli Strains Originating from Serbia",
pages = "235",
volume = "12, 2",
doi = "10.3390/agronomy12020235"
}
Zlatković, N., Gašić, K., Kuzmanović, N., Prokić, A., Ivanović, M., Zivkovic, S.,& Obradović, A.. (2022). Polyphasic Characterization of Acidovorax citrulli Strains Originating from Serbia. in Agronomy
MDPI., 12, 235.
https://doi.org/10.3390/agronomy12020235
Zlatković N, Gašić K, Kuzmanović N, Prokić A, Ivanović M, Zivkovic S, Obradović A. Polyphasic Characterization of Acidovorax citrulli Strains Originating from Serbia. in Agronomy. 2022;12:235.
doi:10.3390/agronomy12020235 .
Zlatković, Nevena, Gašić, Katarina, Kuzmanović, Nemanja, Prokić, Anđelka, Ivanović, Milan, Zivkovic, Svetlana, Obradović, Aleksa, "Polyphasic Characterization of Acidovorax citrulli Strains Originating from Serbia" in Agronomy, 12 (2022):235,
https://doi.org/10.3390/agronomy12020235 . .
1
1

Isolation, Characterization and Draft Genome Analysis of Bacteriophages Infecting Acidovorax citrulli

Gašić, Katarina; Obradović, Mina; Kuzmanović, Nemanja; Zlatković, Nevena; Ivanović, Milan; Ristić, Lela; Obradović, Aleksa

(Frontiers Media S.A., 2022)

TY  - JOUR
AU  - Gašić, Katarina
AU  - Obradović, Mina
AU  - Kuzmanović, Nemanja
AU  - Zlatković, Nevena
AU  - Ivanović, Milan
AU  - Ristić, Lela
AU  - Obradović, Aleksa
PY  - 2022
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/725
AB  - Bacterial fruit blotch and seedling blight, caused by Acidovorax citrulli, is one of the most destructive diseases of melon and watermelon in many countries. Pathogen-free seed and cultural practices are major pillars of the disease control. However, use of bacteriophages as natural biocontrol agents might also contribute to the disease management. Therefore, we isolated 12 bacteriophages specific to A. citrulli, from phyllosphere and rhizosphere of diseased watermelon plants. The phage strains were characterized based on their host range, plaque and virion morphology, thermal inactivation point, adsorption rate, one step growth curve, restriction fragment length polymorphism (RFLP), and genomic analysis. Transmission electron microscopy of three phage strains indicated that they belong to the order Caudovirales, family Siphoviridae. All phages lysed 30 out of 32 tested A. citrulli strains isolated in Serbia, and did not lyse other less related bacterial species. They produced clear plaques, 2 mm in diameter, on bacterial lawns of different A. citrulli strains after 24 h of incubation. The thermal inactivation point was 66 or 67°C. They were stable at pH 5–9, but were sensitive to chloroform and inactivated in either 5 or 10 min exposure to ultraviolet (UV) light. RFLP analysis using EcoRI, BsmI and BamHI enzymes did not show genetic differences among the tested phages. Adsorption rate and one step growth curve were determined for the Acidovorax phage ACF1. Draft genome sequence of the ACF1 phage was 59.377 bp in size, with guanine-cytosine (GC) content 64.5%, including 89 open reading frames. This phage shared a very high genomic identity with Acidovorax phage ACPWH, isolated in South Korea. Evaluation of systemic nature of ACF1 strain showed that it can be absorbed by roots and translocated to upper parts of watermelon plants where it survived up to 10 days.
PB  - Frontiers Media S.A.
T2  - Frontiers in Microbiology
T1  - Isolation, Characterization and Draft Genome Analysis of Bacteriophages Infecting Acidovorax citrulli
IS  - 803789
VL  - 12
DO  - 10.3389/fmicb.2021.803789
ER  - 
@article{
author = "Gašić, Katarina and Obradović, Mina and Kuzmanović, Nemanja and Zlatković, Nevena and Ivanović, Milan and Ristić, Lela and Obradović, Aleksa",
year = "2022",
abstract = "Bacterial fruit blotch and seedling blight, caused by Acidovorax citrulli, is one of the most destructive diseases of melon and watermelon in many countries. Pathogen-free seed and cultural practices are major pillars of the disease control. However, use of bacteriophages as natural biocontrol agents might also contribute to the disease management. Therefore, we isolated 12 bacteriophages specific to A. citrulli, from phyllosphere and rhizosphere of diseased watermelon plants. The phage strains were characterized based on their host range, plaque and virion morphology, thermal inactivation point, adsorption rate, one step growth curve, restriction fragment length polymorphism (RFLP), and genomic analysis. Transmission electron microscopy of three phage strains indicated that they belong to the order Caudovirales, family Siphoviridae. All phages lysed 30 out of 32 tested A. citrulli strains isolated in Serbia, and did not lyse other less related bacterial species. They produced clear plaques, 2 mm in diameter, on bacterial lawns of different A. citrulli strains after 24 h of incubation. The thermal inactivation point was 66 or 67°C. They were stable at pH 5–9, but were sensitive to chloroform and inactivated in either 5 or 10 min exposure to ultraviolet (UV) light. RFLP analysis using EcoRI, BsmI and BamHI enzymes did not show genetic differences among the tested phages. Adsorption rate and one step growth curve were determined for the Acidovorax phage ACF1. Draft genome sequence of the ACF1 phage was 59.377 bp in size, with guanine-cytosine (GC) content 64.5%, including 89 open reading frames. This phage shared a very high genomic identity with Acidovorax phage ACPWH, isolated in South Korea. Evaluation of systemic nature of ACF1 strain showed that it can be absorbed by roots and translocated to upper parts of watermelon plants where it survived up to 10 days.",
publisher = "Frontiers Media S.A.",
journal = "Frontiers in Microbiology",
title = "Isolation, Characterization and Draft Genome Analysis of Bacteriophages Infecting Acidovorax citrulli",
number = "803789",
volume = "12",
doi = "10.3389/fmicb.2021.803789"
}
Gašić, K., Obradović, M., Kuzmanović, N., Zlatković, N., Ivanović, M., Ristić, L.,& Obradović, A.. (2022). Isolation, Characterization and Draft Genome Analysis of Bacteriophages Infecting Acidovorax citrulli. in Frontiers in Microbiology
Frontiers Media S.A.., 12(803789).
https://doi.org/10.3389/fmicb.2021.803789
Gašić K, Obradović M, Kuzmanović N, Zlatković N, Ivanović M, Ristić L, Obradović A. Isolation, Characterization and Draft Genome Analysis of Bacteriophages Infecting Acidovorax citrulli. in Frontiers in Microbiology. 2022;12(803789).
doi:10.3389/fmicb.2021.803789 .
Gašić, Katarina, Obradović, Mina, Kuzmanović, Nemanja, Zlatković, Nevena, Ivanović, Milan, Ristić, Lela, Obradović, Aleksa, "Isolation, Characterization and Draft Genome Analysis of Bacteriophages Infecting Acidovorax citrulli" in Frontiers in Microbiology, 12, no. 803789 (2022),
https://doi.org/10.3389/fmicb.2021.803789 . .
3
2
1

Polyphasic study of phytopathogenic bacterial strains associated with deep bark canker of walnut in Serbia revealed a new species, Brenneria izbisi sp. nov

Gašić, Katarina; Zlatković, Nevena; Kuzmanović, Nemanja

(Frontiers Media, 2022)

TY  - JOUR
AU  - Gašić, Katarina
AU  - Zlatković, Nevena
AU  - Kuzmanović, Nemanja
PY  - 2022
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/646
AB  - Serious outbreaks of walnut deep bark canker were observed on young walnut trees (Juglans regia L.) in two localities in the northern part of Serbia during 2020. From the symptomatic walnut tissues, two types of bacterial colonies were isolated, predominantly, light cream, circular and smooth colonies, as well as small, yellowish, mucoid and convex ones. PCR analysis and phenotypic assays suggested that the former group belongs to Brenneria spp., while the latter isolates were identified as Xanthomonas arboricola pv. juglandis. Within the Brenneria group, two strains were identified as Brenneria nigrifluens, while other 15 strains did not belong to any Brenneria species described so far. Therefore, we selected four representative strains of the unknown Brenneria sp. and subjected them to polyphasic analysis. As expected, in a phylogenetic tree based on partial 16S rDNA sequences, four novel strains grouped with other Brenneria representatives, and showed close phylogenetic relationship to Brenneria salicis. Furthermore, multilocus sequence analysis (MLSA) based on the partial sequences of atpD, gyrB, infB and rpoB housekeeping genes and core-genome phylogeny indicated that the studied strains form a novel and a clearly separate Brenneria lineage. Overall genome relatedness indices showed that they represent a new Brenneria species. The new species can be differentiated from the other Brenneria spp. infecting walnut and closely related B. salicis strains based on phenotypic characteristics, as well. Moreover, the pathogenicity tests on two-year-old walnut plants proved the ability of strains to cause necrosis and longitudinal black lesions and cracks on the trunk and branches of walnut trees. Overall, polyphasic characterization showed that the studied strains isolated from walnut with symptoms of deep bark canker represent a novel species of the genus Brenneria for which the name Brenneria izbisi sp. nov. is proposed. The type strain of B. izbisi is KBI 423T (= CFBP 9035T = LMG 32479T). To facilitate rapid identification of newly described species, a conventional PCR protocol and primers targeting the putative gene hrpP, were developed. Further study should reveal the potential role of each pathogen isolated from symptomatic walnut in disease development as well as possible interaction between them.
PB  - Frontiers Media
T2  - Frontiers in Plant Science
T1  - Polyphasic study of phytopathogenic bacterial strains associated with deep bark canker of walnut in Serbia revealed a new species, Brenneria izbisi sp. nov
VL  - 13
DO  - 10.3389/fpls.2022.1055186
ER  - 
@article{
author = "Gašić, Katarina and Zlatković, Nevena and Kuzmanović, Nemanja",
year = "2022",
abstract = "Serious outbreaks of walnut deep bark canker were observed on young walnut trees (Juglans regia L.) in two localities in the northern part of Serbia during 2020. From the symptomatic walnut tissues, two types of bacterial colonies were isolated, predominantly, light cream, circular and smooth colonies, as well as small, yellowish, mucoid and convex ones. PCR analysis and phenotypic assays suggested that the former group belongs to Brenneria spp., while the latter isolates were identified as Xanthomonas arboricola pv. juglandis. Within the Brenneria group, two strains were identified as Brenneria nigrifluens, while other 15 strains did not belong to any Brenneria species described so far. Therefore, we selected four representative strains of the unknown Brenneria sp. and subjected them to polyphasic analysis. As expected, in a phylogenetic tree based on partial 16S rDNA sequences, four novel strains grouped with other Brenneria representatives, and showed close phylogenetic relationship to Brenneria salicis. Furthermore, multilocus sequence analysis (MLSA) based on the partial sequences of atpD, gyrB, infB and rpoB housekeeping genes and core-genome phylogeny indicated that the studied strains form a novel and a clearly separate Brenneria lineage. Overall genome relatedness indices showed that they represent a new Brenneria species. The new species can be differentiated from the other Brenneria spp. infecting walnut and closely related B. salicis strains based on phenotypic characteristics, as well. Moreover, the pathogenicity tests on two-year-old walnut plants proved the ability of strains to cause necrosis and longitudinal black lesions and cracks on the trunk and branches of walnut trees. Overall, polyphasic characterization showed that the studied strains isolated from walnut with symptoms of deep bark canker represent a novel species of the genus Brenneria for which the name Brenneria izbisi sp. nov. is proposed. The type strain of B. izbisi is KBI 423T (= CFBP 9035T = LMG 32479T). To facilitate rapid identification of newly described species, a conventional PCR protocol and primers targeting the putative gene hrpP, were developed. Further study should reveal the potential role of each pathogen isolated from symptomatic walnut in disease development as well as possible interaction between them.",
publisher = "Frontiers Media",
journal = "Frontiers in Plant Science",
title = "Polyphasic study of phytopathogenic bacterial strains associated with deep bark canker of walnut in Serbia revealed a new species, Brenneria izbisi sp. nov",
volume = "13",
doi = "10.3389/fpls.2022.1055186"
}
Gašić, K., Zlatković, N.,& Kuzmanović, N.. (2022). Polyphasic study of phytopathogenic bacterial strains associated with deep bark canker of walnut in Serbia revealed a new species, Brenneria izbisi sp. nov. in Frontiers in Plant Science
Frontiers Media., 13.
https://doi.org/10.3389/fpls.2022.1055186
Gašić K, Zlatković N, Kuzmanović N. Polyphasic study of phytopathogenic bacterial strains associated with deep bark canker of walnut in Serbia revealed a new species, Brenneria izbisi sp. nov. in Frontiers in Plant Science. 2022;13.
doi:10.3389/fpls.2022.1055186 .
Gašić, Katarina, Zlatković, Nevena, Kuzmanović, Nemanja, "Polyphasic study of phytopathogenic bacterial strains associated with deep bark canker of walnut in Serbia revealed a new species, Brenneria izbisi sp. nov" in Frontiers in Plant Science, 13 (2022),
https://doi.org/10.3389/fpls.2022.1055186 . .
1
3
2

Selective Quantification of Erwinia amylovora Live Cells in Pome Fruit Tree Cankers by Viability Digital PCR

Delgado Santander, Ricardo; Gašić, Katarina; Aćimović, Srđan

(Springer, 2022)

TY  - CHAP
AU  - Delgado Santander, Ricardo
AU  - Gašić, Katarina
AU  - Aćimović, Srđan
PY  - 2022
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/765
AB  - The accurate assessment of Erwinia amylovora live cell populations in fire blight cankers by classic microbiology methods has major limitations. Some of them are the presence of competitive microbiota in samples that inhibit E. amylovora’s growth and the release of toxic compounds by plant material during sample processing, which may hamper the pathogen’s ability to form colonies on solid media. Digital PCR (dPCR) combined with the photo-reactive DNA-binding dye propidium monoazide (PMA) allows selective detection and quantification of live E. amylovora cells in woody samples while overcoming the constraints of culture-dependent methods. This work describes a reliable viability dPCR procedure to determine E. amylovora live cell concentrations in fire blight cankers from pome fruit trees. This protocol can be adapted for the analysis of other types of plant material and enables investigation of ecological, epidemiological, and management significance of cankers as a relatively underexplored part of the fire blight disease cycle.
PB  - Springer
T2  - Plant Pathology, Part of the Methods in Molecular Biology book series (MIMB,volume 2536)
T1  - Selective Quantification of Erwinia amylovora Live Cells in Pome Fruit Tree Cankers by Viability Digital PCR
EP  - 249
SP  - 231
DO  - 10.1007/978-1-0716-2517-0_14
ER  - 
@inbook{
author = "Delgado Santander, Ricardo and Gašić, Katarina and Aćimović, Srđan",
year = "2022",
abstract = "The accurate assessment of Erwinia amylovora live cell populations in fire blight cankers by classic microbiology methods has major limitations. Some of them are the presence of competitive microbiota in samples that inhibit E. amylovora’s growth and the release of toxic compounds by plant material during sample processing, which may hamper the pathogen’s ability to form colonies on solid media. Digital PCR (dPCR) combined with the photo-reactive DNA-binding dye propidium monoazide (PMA) allows selective detection and quantification of live E. amylovora cells in woody samples while overcoming the constraints of culture-dependent methods. This work describes a reliable viability dPCR procedure to determine E. amylovora live cell concentrations in fire blight cankers from pome fruit trees. This protocol can be adapted for the analysis of other types of plant material and enables investigation of ecological, epidemiological, and management significance of cankers as a relatively underexplored part of the fire blight disease cycle.",
publisher = "Springer",
journal = "Plant Pathology, Part of the Methods in Molecular Biology book series (MIMB,volume 2536)",
booktitle = "Selective Quantification of Erwinia amylovora Live Cells in Pome Fruit Tree Cankers by Viability Digital PCR",
pages = "249-231",
doi = "10.1007/978-1-0716-2517-0_14"
}
Delgado Santander, R., Gašić, K.,& Aćimović, S.. (2022). Selective Quantification of Erwinia amylovora Live Cells in Pome Fruit Tree Cankers by Viability Digital PCR. in Plant Pathology, Part of the Methods in Molecular Biology book series (MIMB,volume 2536)
Springer., 231-249.
https://doi.org/10.1007/978-1-0716-2517-0_14
Delgado Santander R, Gašić K, Aćimović S. Selective Quantification of Erwinia amylovora Live Cells in Pome Fruit Tree Cankers by Viability Digital PCR. in Plant Pathology, Part of the Methods in Molecular Biology book series (MIMB,volume 2536). 2022;:231-249.
doi:10.1007/978-1-0716-2517-0_14 .
Delgado Santander, Ricardo, Gašić, Katarina, Aćimović, Srđan, "Selective Quantification of Erwinia amylovora Live Cells in Pome Fruit Tree Cankers by Viability Digital PCR" in Plant Pathology, Part of the Methods in Molecular Biology book series (MIMB,volume 2536) (2022):231-249,
https://doi.org/10.1007/978-1-0716-2517-0_14 . .
1
4
1

Bacteriophages for plant disease control

Choudhary, Manoj; Paret, Mathews; Obradović, Aleksa; Gašić, Katarina; Jeff, Jones

(Burleigh Dodds Science Publishing, 2022)

TY  - CHAP
AU  - Choudhary, Manoj
AU  - Paret, Mathews
AU  - Obradović, Aleksa
AU  - Gašić, Katarina
AU  - Jeff, Jones
PY  - 2022
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/763
AB  - Crop yield loss due to bacterial plant pathogens need to be reduced to increase global food production demand. Currently available disease management strategies involving copper-based bactericides and antibiotics are losing efficacy due to development of resistance in bacteria. There is long familiar demand of environmentally friendly and sustainable strategies to control bacterial diseases. Bacteriophages are virus that kill target bacteria without affecting another microorganism and environment. Bacteriophage efficiency on phyllosphere is mainly affected by ultraviolet (UV) light. Use of combination of phage, mixture with phage carrier bacteria and optimizing time of application helps in persistence of bacteriophage. There are several bacteriophage products already available in the market to control destructive bacterial diseases. Unlike chemical based traditional control measure, bacteriophage mixture can be easily amended to reduce resistance development in bacteria. In this chapter, the authors discuss from phage isolation to interaction with bacteria and control mechanism of plant diseases.
PB  - Burleigh Dodds Science Publishing
T2  - In: Microbial bioprotectants for plant disease management (eds. Köhl, J and Ravensberg, W.), Burleigh Dodds Science Publishing, Sawston, Cambridge, UK, pp: 473-506.
T1  - Bacteriophages for plant disease control
EP  - 506
SP  - 473
DO  - 10.19103/AS.2021.0093.18
ER  - 
@inbook{
author = "Choudhary, Manoj and Paret, Mathews and Obradović, Aleksa and Gašić, Katarina and Jeff, Jones",
year = "2022",
abstract = "Crop yield loss due to bacterial plant pathogens need to be reduced to increase global food production demand. Currently available disease management strategies involving copper-based bactericides and antibiotics are losing efficacy due to development of resistance in bacteria. There is long familiar demand of environmentally friendly and sustainable strategies to control bacterial diseases. Bacteriophages are virus that kill target bacteria without affecting another microorganism and environment. Bacteriophage efficiency on phyllosphere is mainly affected by ultraviolet (UV) light. Use of combination of phage, mixture with phage carrier bacteria and optimizing time of application helps in persistence of bacteriophage. There are several bacteriophage products already available in the market to control destructive bacterial diseases. Unlike chemical based traditional control measure, bacteriophage mixture can be easily amended to reduce resistance development in bacteria. In this chapter, the authors discuss from phage isolation to interaction with bacteria and control mechanism of plant diseases.",
publisher = "Burleigh Dodds Science Publishing",
journal = "In: Microbial bioprotectants for plant disease management (eds. Köhl, J and Ravensberg, W.), Burleigh Dodds Science Publishing, Sawston, Cambridge, UK, pp: 473-506.",
booktitle = "Bacteriophages for plant disease control",
pages = "506-473",
doi = "10.19103/AS.2021.0093.18"
}
Choudhary, M., Paret, M., Obradović, A., Gašić, K.,& Jeff, J.. (2022). Bacteriophages for plant disease control. in In: Microbial bioprotectants for plant disease management (eds. Köhl, J and Ravensberg, W.), Burleigh Dodds Science Publishing, Sawston, Cambridge, UK, pp: 473-506.
Burleigh Dodds Science Publishing., 473-506.
https://doi.org/10.19103/AS.2021.0093.18
Choudhary M, Paret M, Obradović A, Gašić K, Jeff J. Bacteriophages for plant disease control. in In: Microbial bioprotectants for plant disease management (eds. Köhl, J and Ravensberg, W.), Burleigh Dodds Science Publishing, Sawston, Cambridge, UK, pp: 473-506.. 2022;:473-506.
doi:10.19103/AS.2021.0093.18 .
Choudhary, Manoj, Paret, Mathews, Obradović, Aleksa, Gašić, Katarina, Jeff, Jones, "Bacteriophages for plant disease control" in In: Microbial bioprotectants for plant disease management (eds. Köhl, J and Ravensberg, W.), Burleigh Dodds Science Publishing, Sawston, Cambridge, UK, pp: 473-506. (2022):473-506,
https://doi.org/10.19103/AS.2021.0093.18 . .
1

Integrating Science on Xanthomonadaceae for integrated plant disease management in Europe

Koebnik, Ralf; Gašić, Katarina; Obradović, Aleksa

(Belgrade : University, Faculty of Agriculture, 2021)


                                            

                                            
Koebnik, R., Gašić, K.,& Obradović, A.. (2021). Integrating Science on Xanthomonadaceae for integrated plant disease management in Europe. in Integrating Science on Xanthomonadaceae for integrated plant disease management in Europe
Belgrade : University, Faculty of Agriculture..
Koebnik R, Gašić K, Obradović A. Integrating Science on Xanthomonadaceae for integrated plant disease management in Europe. in Integrating Science on Xanthomonadaceae for integrated plant disease management in Europe. 2021;..
Koebnik, Ralf, Gašić, Katarina, Obradović, Aleksa, "Integrating Science on Xanthomonadaceae for integrated plant disease management in Europe" in Integrating Science on Xanthomonadaceae for integrated plant disease management in Europe (2021).

Novi koncept održive strategije kontrole bakteriozne pegavosti paprike integracijom bioloških i hemijskih tretmana

Šević, Milan; Prokić, Anđelka; Gašić, Katarina; Obradović, Aleksa

(Institut za zaštitu bilja i životnu sredinu, Beograd, 2021)


                                            

                                            
Šević, M., Prokić, A., Gašić, K.,& Obradović, A.. (2021). Novi koncept održive strategije kontrole bakteriozne pegavosti paprike integracijom bioloških i hemijskih tretmana. in Institut za zaštitu bilja i životnu sredinu
Institut za zaštitu bilja i životnu sredinu, Beograd..
Šević M, Prokić A, Gašić K, Obradović A. Novi koncept održive strategije kontrole bakteriozne pegavosti paprike integracijom bioloških i hemijskih tretmana. in Institut za zaštitu bilja i životnu sredinu. 2021;..
Šević, Milan, Prokić, Anđelka, Gašić, Katarina, Obradović, Aleksa, "Novi koncept održive strategije kontrole bakteriozne pegavosti paprike integracijom bioloških i hemijskih tretmana" in Institut za zaštitu bilja i životnu sredinu (2021).

Incidence and molecular characterization of potato leaf roll virus in seed potato production in Serbia

Ristić, Lela; Vučurović, Ivan; Vučurović, Ana; Živković, Svetlana; Gašić, Katarina; Kuzmanović, Slobodan; Starović, Mira

(Springer Verlag, 2021)

TY  - JOUR
AU  - Ristić, Lela
AU  - Vučurović, Ivan
AU  - Vučurović, Ana
AU  - Živković, Svetlana
AU  - Gašić, Katarina
AU  - Kuzmanović, Slobodan
AU  - Starović, Mira
PY  - 2021
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/716
AB  - The distribution and frequency of potato leaf roll virus in the four most important potato growing regions in Serbia were studied during the seven years (2012–18). One hundred randomly collected potato tubers were sampled from each seed lot. The young leaves that developed in three weeks were sampled and tested to record infection rate. The presence of potato leaf roll virus was detected by double-antibody sandwich enzyme-linked immunosorbent assay and disease incidence was calculated using standard formula. The obtained result showed that the highest prevalence of potato leaf roll virus was detected from seed potato samples originated from the Raški region during 2018 (20.7%), while in the Moravički region, only 2.3–11.1% of the potato leaf roll virus was detected every year. The average annual potato leaf roll virus infection was the highest in 2012 (8.4%) and 2018 (8.0%). For further confirmation of potato leaf roll virus infection, reverse transcription (RT)-PCR was performed using specific primers PLRVCPvEcoRI /PLRVCPcNcoI, designed to amplify a 650 bp fragment of the full-length coat protein gene. The PCR products derived from 26 isolates were directly sequenced using the same primer pair as in RT-PCR. The coat protein sequence analysis revealed that the Serbian potato leaf roll virus isolates showed very low nucleotide diversity (95.9–100%). They shared the highest nt identities of 98.08–99.36% with the sequences of potato leaf roll virus isolates deposited in the GenBank from other parts of the world. Phylogenetic analysis and the haplotype network of the coat protein gene sequences showed that the Serbian potato leaf roll virus isolates could be classified in two different groups indicating two possible introductions of the virus to Serbia. The results of this study confirmed the importance of potato leaf roll virus in seed potato production in Serbia. Additionally, this research highlights the need for a continuous monitoring of the potato seeds produced in Serbia as well as imported seeds for the presence of potato leaf roll virus.
PB  - Springer Verlag
T2  - European Journal of Plant Pathology
T1  - Incidence and molecular characterization of potato leaf roll virus in seed potato production in Serbia
EP  - 324
IS  - 2
SP  - 315
VL  - 160
DO  - 10.1007/s10658-021-02243-6
ER  - 
@article{
author = "Ristić, Lela and Vučurović, Ivan and Vučurović, Ana and Živković, Svetlana and Gašić, Katarina and Kuzmanović, Slobodan and Starović, Mira",
year = "2021",
abstract = "The distribution and frequency of potato leaf roll virus in the four most important potato growing regions in Serbia were studied during the seven years (2012–18). One hundred randomly collected potato tubers were sampled from each seed lot. The young leaves that developed in three weeks were sampled and tested to record infection rate. The presence of potato leaf roll virus was detected by double-antibody sandwich enzyme-linked immunosorbent assay and disease incidence was calculated using standard formula. The obtained result showed that the highest prevalence of potato leaf roll virus was detected from seed potato samples originated from the Raški region during 2018 (20.7%), while in the Moravički region, only 2.3–11.1% of the potato leaf roll virus was detected every year. The average annual potato leaf roll virus infection was the highest in 2012 (8.4%) and 2018 (8.0%). For further confirmation of potato leaf roll virus infection, reverse transcription (RT)-PCR was performed using specific primers PLRVCPvEcoRI /PLRVCPcNcoI, designed to amplify a 650 bp fragment of the full-length coat protein gene. The PCR products derived from 26 isolates were directly sequenced using the same primer pair as in RT-PCR. The coat protein sequence analysis revealed that the Serbian potato leaf roll virus isolates showed very low nucleotide diversity (95.9–100%). They shared the highest nt identities of 98.08–99.36% with the sequences of potato leaf roll virus isolates deposited in the GenBank from other parts of the world. Phylogenetic analysis and the haplotype network of the coat protein gene sequences showed that the Serbian potato leaf roll virus isolates could be classified in two different groups indicating two possible introductions of the virus to Serbia. The results of this study confirmed the importance of potato leaf roll virus in seed potato production in Serbia. Additionally, this research highlights the need for a continuous monitoring of the potato seeds produced in Serbia as well as imported seeds for the presence of potato leaf roll virus.",
publisher = "Springer Verlag",
journal = "European Journal of Plant Pathology",
title = "Incidence and molecular characterization of potato leaf roll virus in seed potato production in Serbia",
pages = "324-315",
number = "2",
volume = "160",
doi = "10.1007/s10658-021-02243-6"
}
Ristić, L., Vučurović, I., Vučurović, A., Živković, S., Gašić, K., Kuzmanović, S.,& Starović, M.. (2021). Incidence and molecular characterization of potato leaf roll virus in seed potato production in Serbia. in European Journal of Plant Pathology
Springer Verlag., 160(2), 315-324.
https://doi.org/10.1007/s10658-021-02243-6
Ristić L, Vučurović I, Vučurović A, Živković S, Gašić K, Kuzmanović S, Starović M. Incidence and molecular characterization of potato leaf roll virus in seed potato production in Serbia. in European Journal of Plant Pathology. 2021;160(2):315-324.
doi:10.1007/s10658-021-02243-6 .
Ristić, Lela, Vučurović, Ivan, Vučurović, Ana, Živković, Svetlana, Gašić, Katarina, Kuzmanović, Slobodan, Starović, Mira, "Incidence and molecular characterization of potato leaf roll virus in seed potato production in Serbia" in European Journal of Plant Pathology, 160, no. 2 (2021):315-324,
https://doi.org/10.1007/s10658-021-02243-6 . .
1
1
1

Osvrt na proučavanje fitopatogenih bakterija i fitoplazmi u Srbiji

Obradović, Aleksa; Ivanović, Milan; Gašić, Katarina; Grahovac, Mila; Duduk, Bojan; Milijašević-Marčić, Svetlana; Ignjatov, Maja; Šević, Milan

(Društvo za zaštitu bilja Srbije, 2021)

TY  - CONF
AU  - Obradović, Aleksa
AU  - Ivanović, Milan
AU  - Gašić, Katarina
AU  - Grahovac, Mila
AU  - Duduk, Bojan
AU  - Milijašević-Marčić, Svetlana
AU  - Ignjatov, Maja
AU  - Šević, Milan
PY  - 2021
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/812
AB  - Istraživanja akademika Živojina Tešića iz 1934. godine, a zatim i prof. Dragoljuba Šutića
u prvoj deceniji posle drugog svetskog rata, na Poljoprivredno-šumarskom, kasnije
Poljoprivrednom fakultetu u Zemunu, mogu se smatrati početkom proučavanja fitopatogenih
bakterija (FPB) u Srbiji. Od tada do danas istraživači su prošli mukotrpan put tokom kojeg su
razvijali i širili znanja na polju ovog dela fitopatologije. Uvođenjem fitobakteriologije u
nastavu na Poljoprivrednim fakultetima u Novom Sadu i Beogradu, zahvaljujući entuzijazmu i
naučnoj dalekovidosti profesora Momčila Arsenijevića i Milana Panića, ova oblast istraživanja
dobila je na intenzitetu i značaju. Poslednjih decenija razvoj fitobakteriologije tekao je
dinamično i ubrzano, zahvaljujući sve bržem napretku nauke i tehnologije, razvoju sredstava
komunikacije, posvećenosti istraživača, naučnoj saradnji, studijskim boravcima u
međunarodnim obrazovnim i naučnim institucijama, novim metodama izučavanja i
olakšanom pristupu informacijama. U Srbiji, najviše pažnje je posvećeno proučavanju FPB, a
kasnije i fitoplazmi, poreklom iz ekonomski značajnih biljnih vrsta voćaka, vinove loze,
povrtarskih, ratarskih i ukrasnih biljaka. Zahvaljujući interesovanju i entuzijazmu nevelikog
broja istraživača, usvajane su najsavremenije metode istraživanja ovih patogena.
Fitobakteriološka istraživanja su među prvima uvela u primenu molekularne metode u
domaćoj fitopatologiji. Primena PCR metode omogućila je razvoj nove epohe istraživanja
prokariota u Srbiji i upotrebu tehnika kao što su sekvenciranje genoma, analiza specifičnih ili
konstitutivnih gena, kvantitativni ili Real-time PCR, a to su metode koje se danas rutinski
koriste u istrživanjima prokariota u Srbiji. U novijem periodu razvijena su istraživanja u
oblasti detekcije, identifikacije i karakterizacije fitoplazmi u Srbiji, prateći ili predvodeći
svetska saznanja u ovoj oblasti. Primena savremenih metoda istraživanja omogućila je
izučavanje genetske strukture populacija fitopatogenih prokariota, detekciju novih vrsta u
našoj zemlji, stvaranje markera za precizniju identifikaciju ili proširivanje znanja iz oblasti
epidemiologije fitopatogenih prokariota. Osim toga, stečena saznanja se koriste u razvoju
inovativnih mogućnosti zaštite od bakterioza biološkim i konvencionalnim metodama. Decenijama sticano i unapređivano znanje neprekidno se prenosi generacijama koje dolaze,
kroz učešće fitobakteriologa u nastavnom procesu i kroz mentorski rad u visokoškolskim i
naučnim ustanovama, stvarajući tako osnov za dalji razvoj i napredak fitobakteriologije u
Srbiji.
PB  - Društvo za zaštitu bilja Srbije
C3  - Zbornik rezimea radova, 16. Savetovanje o zaštiti bilja, Zlatibor, 22-25. februar 2021. 18-19
T1  - Osvrt na proučavanje fitopatogenih bakterija i fitoplazmi u Srbiji
ER  - 
@conference{
author = "Obradović, Aleksa and Ivanović, Milan and Gašić, Katarina and Grahovac, Mila and Duduk, Bojan and Milijašević-Marčić, Svetlana and Ignjatov, Maja and Šević, Milan",
year = "2021",
abstract = "Istraživanja akademika Živojina Tešića iz 1934. godine, a zatim i prof. Dragoljuba Šutića
u prvoj deceniji posle drugog svetskog rata, na Poljoprivredno-šumarskom, kasnije
Poljoprivrednom fakultetu u Zemunu, mogu se smatrati početkom proučavanja fitopatogenih
bakterija (FPB) u Srbiji. Od tada do danas istraživači su prošli mukotrpan put tokom kojeg su
razvijali i širili znanja na polju ovog dela fitopatologije. Uvođenjem fitobakteriologije u
nastavu na Poljoprivrednim fakultetima u Novom Sadu i Beogradu, zahvaljujući entuzijazmu i
naučnoj dalekovidosti profesora Momčila Arsenijevića i Milana Panića, ova oblast istraživanja
dobila je na intenzitetu i značaju. Poslednjih decenija razvoj fitobakteriologije tekao je
dinamično i ubrzano, zahvaljujući sve bržem napretku nauke i tehnologije, razvoju sredstava
komunikacije, posvećenosti istraživača, naučnoj saradnji, studijskim boravcima u
međunarodnim obrazovnim i naučnim institucijama, novim metodama izučavanja i
olakšanom pristupu informacijama. U Srbiji, najviše pažnje je posvećeno proučavanju FPB, a
kasnije i fitoplazmi, poreklom iz ekonomski značajnih biljnih vrsta voćaka, vinove loze,
povrtarskih, ratarskih i ukrasnih biljaka. Zahvaljujući interesovanju i entuzijazmu nevelikog
broja istraživača, usvajane su najsavremenije metode istraživanja ovih patogena.
Fitobakteriološka istraživanja su među prvima uvela u primenu molekularne metode u
domaćoj fitopatologiji. Primena PCR metode omogućila je razvoj nove epohe istraživanja
prokariota u Srbiji i upotrebu tehnika kao što su sekvenciranje genoma, analiza specifičnih ili
konstitutivnih gena, kvantitativni ili Real-time PCR, a to su metode koje se danas rutinski
koriste u istrživanjima prokariota u Srbiji. U novijem periodu razvijena su istraživanja u
oblasti detekcije, identifikacije i karakterizacije fitoplazmi u Srbiji, prateći ili predvodeći
svetska saznanja u ovoj oblasti. Primena savremenih metoda istraživanja omogućila je
izučavanje genetske strukture populacija fitopatogenih prokariota, detekciju novih vrsta u
našoj zemlji, stvaranje markera za precizniju identifikaciju ili proširivanje znanja iz oblasti
epidemiologije fitopatogenih prokariota. Osim toga, stečena saznanja se koriste u razvoju
inovativnih mogućnosti zaštite od bakterioza biološkim i konvencionalnim metodama. Decenijama sticano i unapređivano znanje neprekidno se prenosi generacijama koje dolaze,
kroz učešće fitobakteriologa u nastavnom procesu i kroz mentorski rad u visokoškolskim i
naučnim ustanovama, stvarajući tako osnov za dalji razvoj i napredak fitobakteriologije u
Srbiji.",
publisher = "Društvo za zaštitu bilja Srbije",
journal = "Zbornik rezimea radova, 16. Savetovanje o zaštiti bilja, Zlatibor, 22-25. februar 2021. 18-19",
title = "Osvrt na proučavanje fitopatogenih bakterija i fitoplazmi u Srbiji"
}
Obradović, A., Ivanović, M., Gašić, K., Grahovac, M., Duduk, B., Milijašević-Marčić, S., Ignjatov, M.,& Šević, M.. (2021). Osvrt na proučavanje fitopatogenih bakterija i fitoplazmi u Srbiji. in Zbornik rezimea radova, 16. Savetovanje o zaštiti bilja, Zlatibor, 22-25. februar 2021. 18-19
Društvo za zaštitu bilja Srbije..
Obradović A, Ivanović M, Gašić K, Grahovac M, Duduk B, Milijašević-Marčić S, Ignjatov M, Šević M. Osvrt na proučavanje fitopatogenih bakterija i fitoplazmi u Srbiji. in Zbornik rezimea radova, 16. Savetovanje o zaštiti bilja, Zlatibor, 22-25. februar 2021. 18-19. 2021;..
Obradović, Aleksa, Ivanović, Milan, Gašić, Katarina, Grahovac, Mila, Duduk, Bojan, Milijašević-Marčić, Svetlana, Ignjatov, Maja, Šević, Milan, "Osvrt na proučavanje fitopatogenih bakterija i fitoplazmi u Srbiji" in Zbornik rezimea radova, 16. Savetovanje o zaštiti bilja, Zlatibor, 22-25. februar 2021. 18-19 (2021).

Bacteriophage-mediated control of phytopathogenic xanthomonads: A promising green solution for the future

Stefani, Emilio; Obradović, Aleksa; Gašić, Katarina; Altin, Irem; Nagy, Ildikó K.; Kovács, Tamás

(MDPI, 2021)

TY  - JOUR
AU  - Stefani, Emilio
AU  - Obradović, Aleksa
AU  - Gašić, Katarina
AU  - Altin, Irem
AU  - Nagy, Ildikó K.
AU  - Kovács, Tamás
PY  - 2021
UR  - http://aspace.agrif.bg.ac.rs/handle/123456789/5851
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/610
AB  - Xanthomonads, members of the family Xanthomonadaceae, are economically important plant pathogenic bacteria responsible for infections of over 400 plant species. Bacteriophage-based biopesticides can provide an environmentally friendly, effective solution to control these bacteria. Bacteriophage-based biocontrol has important advantages over chemical pesticides, and treatment with these biopesticides is a minor intervention into the microflora. However, bacteriophages’ agricultural application has limitations rooted in these viruses’ biological properties as active sub-stances. These disadvantageous features, together with the complicated registration process of bacteriophage-based biopesticides, means that there are few products available on the market. This review summarizes our knowledge of the Xanthomonas-host plant and bacteriophage-host bacterium interaction’s possible influence on bacteriophage-based biocontrol strategies and provides examples of greenhouse and field trials and products readily available in the EU and the USA. It also details the most important advantages and limitations of the agricultural application of bacteriophages. This paper also investigates the legal background and industrial property right issues of bacteriophage-based biopesticides. When appropriately applied, bacteriophages can provide a promising tool against xanthomonads, a possibility that is untapped. Information presented in this review aims to explore the potential of bacteriophage-based biopesticides in the control of xanthomonads in the future.
PB  - MDPI
T2  - Microorganisms
T1  - Bacteriophage-mediated control of phytopathogenic xanthomonads: A promising green solution for the future
IS  - 5
SP  - 1056
VL  - 9
DO  - 10.3390/microorganisms9051056
ER  - 
@article{
author = "Stefani, Emilio and Obradović, Aleksa and Gašić, Katarina and Altin, Irem and Nagy, Ildikó K. and Kovács, Tamás",
year = "2021",
abstract = "Xanthomonads, members of the family Xanthomonadaceae, are economically important plant pathogenic bacteria responsible for infections of over 400 plant species. Bacteriophage-based biopesticides can provide an environmentally friendly, effective solution to control these bacteria. Bacteriophage-based biocontrol has important advantages over chemical pesticides, and treatment with these biopesticides is a minor intervention into the microflora. However, bacteriophages’ agricultural application has limitations rooted in these viruses’ biological properties as active sub-stances. These disadvantageous features, together with the complicated registration process of bacteriophage-based biopesticides, means that there are few products available on the market. This review summarizes our knowledge of the Xanthomonas-host plant and bacteriophage-host bacterium interaction’s possible influence on bacteriophage-based biocontrol strategies and provides examples of greenhouse and field trials and products readily available in the EU and the USA. It also details the most important advantages and limitations of the agricultural application of bacteriophages. This paper also investigates the legal background and industrial property right issues of bacteriophage-based biopesticides. When appropriately applied, bacteriophages can provide a promising tool against xanthomonads, a possibility that is untapped. Information presented in this review aims to explore the potential of bacteriophage-based biopesticides in the control of xanthomonads in the future.",
publisher = "MDPI",
journal = "Microorganisms",
title = "Bacteriophage-mediated control of phytopathogenic xanthomonads: A promising green solution for the future",
number = "5",
pages = "1056",
volume = "9",
doi = "10.3390/microorganisms9051056"
}
Stefani, E., Obradović, A., Gašić, K., Altin, I., Nagy, I. K.,& Kovács, T.. (2021). Bacteriophage-mediated control of phytopathogenic xanthomonads: A promising green solution for the future. in Microorganisms
MDPI., 9(5), 1056.
https://doi.org/10.3390/microorganisms9051056
Stefani E, Obradović A, Gašić K, Altin I, Nagy IK, Kovács T. Bacteriophage-mediated control of phytopathogenic xanthomonads: A promising green solution for the future. in Microorganisms. 2021;9(5):1056.
doi:10.3390/microorganisms9051056 .
Stefani, Emilio, Obradović, Aleksa, Gašić, Katarina, Altin, Irem, Nagy, Ildikó K., Kovács, Tamás, "Bacteriophage-mediated control of phytopathogenic xanthomonads: A promising green solution for the future" in Microorganisms, 9, no. 5 (2021):1056,
https://doi.org/10.3390/microorganisms9051056 . .
1
22
2
21

Considerations for Using Bacteriophages in Plant Pathosystems

Obradović, Aleksa; Jones, Jeffrey B; Botond, Balogh; Gašić, Katarina

(Caister Academic Press, 2020-06)

TY  - CHAP
AU  - Obradović, Aleksa
AU  - Jones, Jeffrey B
AU  - Botond, Balogh
AU  - Gašić, Katarina
PY  - 2020-06
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/764
AB  - Lytic bacteriophages (phages) have the potential for controlling susceptible bacteria in the rhizosphere or phyllosphere. The success of phage application in plant disease control requires that high populations of both phage and bacterium exist in order to initiate a chain reaction of bacterial lysis. Physical factors in natural environments such as the presence of biofilms that trap phages, low soil pH which inactivates phages, low rates of diffusion of phages in soil that prevent contact with target bacteria, and inactivation of phages upon exposure to ultraviolet (UV) light and desiccation, all impact successful use of phages in control of plant pathogenic bacteria. Other considerations relate to the bacterial strains which exist in nature. The bacterial species may have a low or high degree of variation in sensitivity to phages. Therefore, phage selection for field use requires careful monitoring of the targeted bacterial strains in the field due to the potential for strain variation and the likelihood for development of resistance to the deployed phages. Application timing has also been shown to be an important factor in improving the efficacy of phages. For instance, UV light is deleterious to phages and upon exposure phage populations plummet; therefore, evening applications of phages result in persistence on leaf surfaces for longer periods of time and may result in improved disease control. Extending the period of time that phages persist in the phyllosphere has been a major hurdle. Formulations have been identified which improve the persistence of phages on leaf surfaces; however, there is a need to identify superior formulations that extend the life on leaf surfaces from hours to days. Another strategy for maintaining high populations of phages has been to use non-pathogenic bacterial strains that are sensitive to the phage(s) or a closely related organism that does not cause disease on the plant host. Finally, phages may have value as part of an integrated management strategy.
PB  - Caister Academic Press
T2  - In: Bacterial Viruses: Exploitation for Biocontrol and Therapeutics (eds. Coffey, A. and Buttimer, C.), Caister Academic Press, Poole, UK, pp: 257-282.
T1  - Considerations for Using Bacteriophages in Plant Pathosystems
EP  - 282
SP  - 257
DO  - 10.21775/9781913652517.07
ER  - 
@inbook{
author = "Obradović, Aleksa and Jones, Jeffrey B and Botond, Balogh and Gašić, Katarina",
year = "2020-06",
abstract = "Lytic bacteriophages (phages) have the potential for controlling susceptible bacteria in the rhizosphere or phyllosphere. The success of phage application in plant disease control requires that high populations of both phage and bacterium exist in order to initiate a chain reaction of bacterial lysis. Physical factors in natural environments such as the presence of biofilms that trap phages, low soil pH which inactivates phages, low rates of diffusion of phages in soil that prevent contact with target bacteria, and inactivation of phages upon exposure to ultraviolet (UV) light and desiccation, all impact successful use of phages in control of plant pathogenic bacteria. Other considerations relate to the bacterial strains which exist in nature. The bacterial species may have a low or high degree of variation in sensitivity to phages. Therefore, phage selection for field use requires careful monitoring of the targeted bacterial strains in the field due to the potential for strain variation and the likelihood for development of resistance to the deployed phages. Application timing has also been shown to be an important factor in improving the efficacy of phages. For instance, UV light is deleterious to phages and upon exposure phage populations plummet; therefore, evening applications of phages result in persistence on leaf surfaces for longer periods of time and may result in improved disease control. Extending the period of time that phages persist in the phyllosphere has been a major hurdle. Formulations have been identified which improve the persistence of phages on leaf surfaces; however, there is a need to identify superior formulations that extend the life on leaf surfaces from hours to days. Another strategy for maintaining high populations of phages has been to use non-pathogenic bacterial strains that are sensitive to the phage(s) or a closely related organism that does not cause disease on the plant host. Finally, phages may have value as part of an integrated management strategy.",
publisher = "Caister Academic Press",
journal = "In: Bacterial Viruses: Exploitation for Biocontrol and Therapeutics (eds. Coffey, A. and Buttimer, C.), Caister Academic Press, Poole, UK, pp: 257-282.",
booktitle = "Considerations for Using Bacteriophages in Plant Pathosystems",
pages = "282-257",
doi = "10.21775/9781913652517.07"
}
Obradović, A., Jones, J. B., Botond, B.,& Gašić, K.. (2020-06). Considerations for Using Bacteriophages in Plant Pathosystems. in In: Bacterial Viruses: Exploitation for Biocontrol and Therapeutics (eds. Coffey, A. and Buttimer, C.), Caister Academic Press, Poole, UK, pp: 257-282.
Caister Academic Press., 257-282.
https://doi.org/10.21775/9781913652517.07
Obradović A, Jones JB, Botond B, Gašić K. Considerations for Using Bacteriophages in Plant Pathosystems. in In: Bacterial Viruses: Exploitation for Biocontrol and Therapeutics (eds. Coffey, A. and Buttimer, C.), Caister Academic Press, Poole, UK, pp: 257-282.. 2020;:257-282.
doi:10.21775/9781913652517.07 .
Obradović, Aleksa, Jones, Jeffrey B, Botond, Balogh, Gašić, Katarina, "Considerations for Using Bacteriophages in Plant Pathosystems" in In: Bacterial Viruses: Exploitation for Biocontrol and Therapeutics (eds. Coffey, A. and Buttimer, C.), Caister Academic Press, Poole, UK, pp: 257-282. (2020-06):257-282,
https://doi.org/10.21775/9781913652517.07 . .
2

First Report of a Leaf Spot Disease Caused by Alternaria protenta on the Datura stramonium in Serbia

Blagojević, Jovana; Janjatović, S.; Ignjatov, Maja; Trkulja, Nenad; Gašić, Katarina; Ivanović, Žarko

(American Phytopathological Society, 2020)


                                            

                                            
Blagojević, J., Janjatović, S., Ignjatov, M., Trkulja, N., Gašić, K.,& Ivanović, Ž.. (2020). First Report of a Leaf Spot Disease Caused by Alternaria protenta on the Datura stramonium in Serbia. in Plant Disease
American Phytopathological Society., 104(3), 986.
https://doi.org/10.1094/PDIS-06-19-1335-PDN
Blagojević J, Janjatović S, Ignjatov M, Trkulja N, Gašić K, Ivanović Ž. First Report of a Leaf Spot Disease Caused by Alternaria protenta on the Datura stramonium in Serbia. in Plant Disease. 2020;104(3):986.
doi:10.1094/PDIS-06-19-1335-PDN .
Blagojević, Jovana, Janjatović, S., Ignjatov, Maja, Trkulja, Nenad, Gašić, Katarina, Ivanović, Žarko, "First Report of a Leaf Spot Disease Caused by Alternaria protenta on the Datura stramonium in Serbia" in Plant Disease, 104, no. 3 (2020):986,
https://doi.org/10.1094/PDIS-06-19-1335-PDN . .
4
2

Talaromyces minioluteus: New Postharvest Fungal Pathogen in Serbia

Stošić, Stefan; Ristić, Lela; Gašić, Katarina; Starović, Mira; Ljaljevic Grbic, Milica; Vukojevic, Jelena; Živković, Svetlana

(The American Phytopathological Society, 2020)

TY  - JOUR
AU  - Stošić, Stefan
AU  - Ristić, Lela
AU  - Gašić, Katarina
AU  - Starović, Mira
AU  - Ljaljevic Grbic, Milica
AU  - Vukojevic, Jelena
AU  - Živković, Svetlana
PY  - 2020
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/717
AB  - Talaromyces minioluteus is one of the important species of genus Talaromyces, which has cosmopolitan distribution and is encountered on a wide range of different habitats. This species has not been considered as an important plant pathogen, even though it has been isolated from various plant hosts. Fruits and vegetables with Penicillium-like mold symptoms were collected from 2015 to 2017 from markets in Serbia. Isolates originating from quince, tomato, and orange fruits, onion bulbs, and potato tubers were identified and characterized on a morphological, physiological, and molecular level. Morphological and physiological examination included observing micromorphology, testing growth on six different media and at five different temperatures, and production of three enzymes. Molecular identification and characterization were performed using four molecular markers: internal transcribed spacer, β-tubulin, calmodulin, and DNA-dependent RNA polymerase II second largest subunit. The results of morphological and molecular analyses were in agreement, and they proved that the obtained isolates are T. minioluteus. In the pathogenicity assay, T. minioluteus was confirmed as a pathogen of all species tested with the exception of potato tubers. This is the first report of T. minioluteus as a postharvest plant pathogen on quince, tomato, and orange fruit and onion bulbs. Also, this is the first record of T. minioluteus in Serbia.
PB  - The American Phytopathological Society
T2  - Plant Disease
T1  - Talaromyces minioluteus: New Postharvest Fungal Pathogen in Serbia
EP  - 667
IS  - 3
SP  - 656
VL  - 104
DO  - 10.1094/PDIS-08-19-1806-RE
ER  - 
@article{
author = "Stošić, Stefan and Ristić, Lela and Gašić, Katarina and Starović, Mira and Ljaljevic Grbic, Milica and Vukojevic, Jelena and Živković, Svetlana",
year = "2020",
abstract = "Talaromyces minioluteus is one of the important species of genus Talaromyces, which has cosmopolitan distribution and is encountered on a wide range of different habitats. This species has not been considered as an important plant pathogen, even though it has been isolated from various plant hosts. Fruits and vegetables with Penicillium-like mold symptoms were collected from 2015 to 2017 from markets in Serbia. Isolates originating from quince, tomato, and orange fruits, onion bulbs, and potato tubers were identified and characterized on a morphological, physiological, and molecular level. Morphological and physiological examination included observing micromorphology, testing growth on six different media and at five different temperatures, and production of three enzymes. Molecular identification and characterization were performed using four molecular markers: internal transcribed spacer, β-tubulin, calmodulin, and DNA-dependent RNA polymerase II second largest subunit. The results of morphological and molecular analyses were in agreement, and they proved that the obtained isolates are T. minioluteus. In the pathogenicity assay, T. minioluteus was confirmed as a pathogen of all species tested with the exception of potato tubers. This is the first report of T. minioluteus as a postharvest plant pathogen on quince, tomato, and orange fruit and onion bulbs. Also, this is the first record of T. minioluteus in Serbia.",
publisher = "The American Phytopathological Society",
journal = "Plant Disease",
title = "Talaromyces minioluteus: New Postharvest Fungal Pathogen in Serbia",
pages = "667-656",
number = "3",
volume = "104",
doi = "10.1094/PDIS-08-19-1806-RE"
}
Stošić, S., Ristić, L., Gašić, K., Starović, M., Ljaljevic Grbic, M., Vukojevic, J.,& Živković, S.. (2020). Talaromyces minioluteus: New Postharvest Fungal Pathogen in Serbia. in Plant Disease
The American Phytopathological Society., 104(3), 656-667.
https://doi.org/10.1094/PDIS-08-19-1806-RE
Stošić S, Ristić L, Gašić K, Starović M, Ljaljevic Grbic M, Vukojevic J, Živković S. Talaromyces minioluteus: New Postharvest Fungal Pathogen in Serbia. in Plant Disease. 2020;104(3):656-667.
doi:10.1094/PDIS-08-19-1806-RE .
Stošić, Stefan, Ristić, Lela, Gašić, Katarina, Starović, Mira, Ljaljevic Grbic, Milica, Vukojevic, Jelena, Živković, Svetlana, "Talaromyces minioluteus: New Postharvest Fungal Pathogen in Serbia" in Plant Disease, 104, no. 3 (2020):656-667,
https://doi.org/10.1094/PDIS-08-19-1806-RE . .
11
10

First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia

Zlatković, Nevena; Prokić, Anđelka; Gašić, Katarina; Kuzmanović, Nemanja; Ivanović, Milan; Obradović, Aleksa

(American Phytopathological Society, 2019)


                                            

                                            
Zlatković, N., Prokić, A., Gašić, K., Kuzmanović, N., Ivanović, M.,& Obradović, A.. (2019). First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia. in Plant Disease
American Phytopathological Society., 103(10), 2667.
https://doi.org/10.1094/PDIS-12-18-2213-PDN
Zlatković N, Prokić A, Gašić K, Kuzmanović N, Ivanović M, Obradović A. First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia. in Plant Disease. 2019;103(10):2667.
doi:10.1094/PDIS-12-18-2213-PDN .
Zlatković, Nevena, Prokić, Anđelka, Gašić, Katarina, Kuzmanović, Nemanja, Ivanović, Milan, Obradović, Aleksa, "First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia" in Plant Disease, 103, no. 10 (2019):2667,
https://doi.org/10.1094/PDIS-12-18-2213-PDN . .
1
12
2

Bakteriofag KF1 - novi biološki agens za zaštitu paprike od bakteriozne pegavosti

Gašić, Katarina; Šević, Milan; Obradović, Aleksa

(Institut za zaštitu bilja i životnu sredinu, Beograd, 2019)


                                            

                                            
Gašić, K., Šević, M.,& Obradović, A.. (2019). Bakteriofag KF1 - novi biološki agens za zaštitu paprike od bakteriozne pegavosti. in Institut za zaštitu bilja i životnu sredinu
Institut za zaštitu bilja i životnu sredinu, Beograd..
Gašić K, Šević M, Obradović A. Bakteriofag KF1 - novi biološki agens za zaštitu paprike od bakteriozne pegavosti. in Institut za zaštitu bilja i životnu sredinu. 2019;..
Gašić, Katarina, Šević, Milan, Obradović, Aleksa, "Bakteriofag KF1 - novi biološki agens za zaštitu paprike od bakteriozne pegavosti" in Institut za zaštitu bilja i životnu sredinu (2019).

First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia

Zlatković, Nevena; Prokić, Anđelka; Gašić, Katarina; Kuzmanović, Nemanja; Ivanović, Milan; Obradović, Aleksa

(American Phytopathological Society, 2019)

TY  - JOUR
AU  - Zlatković, Nevena
AU  - Prokić, Anđelka
AU  - Gašić, Katarina
AU  - Kuzmanović, Nemanja
AU  - Ivanović, Milan
AU  - Obradović, Aleksa
PY  - 2019
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/1143
AB  - Watermelon (Citrullus lanatus) and squash (Cucurbita pepo) are traditionally grown in northern Serbia, in the province of Vojvodina. Most of the cucurbit cultivars grown in Serbia originate from imported seed. In July 2013, round, water-soaked lesions were observed on the fruits on sporadic squash plants grown in two fields of the breeder variety trials in Bački Petrovac. Affected tissue was light brown, slightly sunken, soft, and macerated. From symptomatic plants (cultivar GL Maxima), showing 30% symptom intensity, a uniform population of bacterial colonies was isolated, and one strain was chosen for the collection. In August of the following season, infection of the vine was observed on watermelon plants (cultivar unknown) grown in a commercial field in Čelarevo. Soft rot brownish lesions developed on infected stems, resulting in collapse and wilting of entire vines. The number of plants affected with symptoms was less than 10%. From the colonies isolated from the diseased tissue, two bacterial strains were purified and stored in the collection. Being pectolytic and isolated from cucurbits, the squash strain and two watermelon strains were subjected to further characterization. The strains developed white-gray, nonmucoid, round colonies with irregular margins on nutrient agar medium. They were gram and oxidase negative, tobacco HR and catalase positive, facultative anaerobes, nonfluorescent, caused soft rot on potato tuber slices, grew at 37°C, and reduced nitrate. They neither utilized arginine nor produced acid from sorbitol and inositol, showing characteristics of Pectobacterium species (De Boer and Kelman 2001). The PCR assay was carried out using primers BR1f/L1r (Duarte et al. 2004), specific for Pectobacterium carotovorum subsp. brasiliense (Pcb). A specific fragment of 322 bp was amplified for all three strains tested. The 16S rDNA sequence analysis (GenBank nos. MH031784, MH031785, and MH031786) showed 99% identity to the sequences of Pcb isolated from cucumber (CP020350), pepper (KX377597), and cabbage (KY021040) in China and potato in Japan (LC146476). The recA (MK911735, MK911736, and MK911737) and gapA (MK911738, MK911739, and MK911740) sequence analysis of three strains showed the highest nucleotide identity (100 to 98.35% and 99.42 to 98.08%, respectively) with Pcb previously deposited in NCBI GenBank database. Pathogenicity of the strains was tested on 2-week-old watermelon (cv. Rosa) and melon (cv. Sezam) seedlings, grown in a commercial potting mix in a greenhouse, as well as on mature zucchini fruits. Three seedlings per strain were inoculated by spraying with bacterial suspension (approx. 1 × 108 CFU/ml) using a handheld sprayer. Inoculated plants were incubated under plastic bags for 24 h and afterward maintained in a greenhouse at 28 ± 2°C. Two days after inoculation, water-soaked lesions developed on cotyledons of the watermelon and melon plants. No symptoms were observed on control plants sprayed with water. Three zucchini fruits were inoculated by pricking with a syringe and hypodermic needle and leaving a droplet of bacterial suspension (approx. 1 × 107 CFU/ml) at the point of inoculation. Inoculated fruits were placed on wet filter paper in a sealed plastic container at 28 ± 2°C. Treatment with sterile distilled water was used as a negative control. Discoloration of the tissue and soft rot spreading from the inoculation point developed within 48 h from inoculation. No symptoms developed on the control fruits. To complete Koch’s postulates, bacteria were reisolated from the inoculated plant and fruit tissue and were identified as Pcb by PCR assay (Duarte et al. 2004). This is the first report of Pcb causing soft rot of squash and watermelon in Serbia. The origin of the pathogen remained unknown. It might have been present in Serbia for some time but misidentified in previous studies that could not discriminate this subspecies or recently introduced by infected seed.
PB  - American Phytopathological Society
T2  - Plant Disease
T1  - First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia
IS  - 10
SP  - 2667
VL  - 103
DO  - 10.1094/PDIS-12-18-2213-PDN
ER  - 
@article{
author = "Zlatković, Nevena and Prokić, Anđelka and Gašić, Katarina and Kuzmanović, Nemanja and Ivanović, Milan and Obradović, Aleksa",
year = "2019",
abstract = "Watermelon (Citrullus lanatus) and squash (Cucurbita pepo) are traditionally grown in northern Serbia, in the province of Vojvodina. Most of the cucurbit cultivars grown in Serbia originate from imported seed. In July 2013, round, water-soaked lesions were observed on the fruits on sporadic squash plants grown in two fields of the breeder variety trials in Bački Petrovac. Affected tissue was light brown, slightly sunken, soft, and macerated. From symptomatic plants (cultivar GL Maxima), showing 30% symptom intensity, a uniform population of bacterial colonies was isolated, and one strain was chosen for the collection. In August of the following season, infection of the vine was observed on watermelon plants (cultivar unknown) grown in a commercial field in Čelarevo. Soft rot brownish lesions developed on infected stems, resulting in collapse and wilting of entire vines. The number of plants affected with symptoms was less than 10%. From the colonies isolated from the diseased tissue, two bacterial strains were purified and stored in the collection. Being pectolytic and isolated from cucurbits, the squash strain and two watermelon strains were subjected to further characterization. The strains developed white-gray, nonmucoid, round colonies with irregular margins on nutrient agar medium. They were gram and oxidase negative, tobacco HR and catalase positive, facultative anaerobes, nonfluorescent, caused soft rot on potato tuber slices, grew at 37°C, and reduced nitrate. They neither utilized arginine nor produced acid from sorbitol and inositol, showing characteristics of Pectobacterium species (De Boer and Kelman 2001). The PCR assay was carried out using primers BR1f/L1r (Duarte et al. 2004), specific for Pectobacterium carotovorum subsp. brasiliense (Pcb). A specific fragment of 322 bp was amplified for all three strains tested. The 16S rDNA sequence analysis (GenBank nos. MH031784, MH031785, and MH031786) showed 99% identity to the sequences of Pcb isolated from cucumber (CP020350), pepper (KX377597), and cabbage (KY021040) in China and potato in Japan (LC146476). The recA (MK911735, MK911736, and MK911737) and gapA (MK911738, MK911739, and MK911740) sequence analysis of three strains showed the highest nucleotide identity (100 to 98.35% and 99.42 to 98.08%, respectively) with Pcb previously deposited in NCBI GenBank database. Pathogenicity of the strains was tested on 2-week-old watermelon (cv. Rosa) and melon (cv. Sezam) seedlings, grown in a commercial potting mix in a greenhouse, as well as on mature zucchini fruits. Three seedlings per strain were inoculated by spraying with bacterial suspension (approx. 1 × 108 CFU/ml) using a handheld sprayer. Inoculated plants were incubated under plastic bags for 24 h and afterward maintained in a greenhouse at 28 ± 2°C. Two days after inoculation, water-soaked lesions developed on cotyledons of the watermelon and melon plants. No symptoms were observed on control plants sprayed with water. Three zucchini fruits were inoculated by pricking with a syringe and hypodermic needle and leaving a droplet of bacterial suspension (approx. 1 × 107 CFU/ml) at the point of inoculation. Inoculated fruits were placed on wet filter paper in a sealed plastic container at 28 ± 2°C. Treatment with sterile distilled water was used as a negative control. Discoloration of the tissue and soft rot spreading from the inoculation point developed within 48 h from inoculation. No symptoms developed on the control fruits. To complete Koch’s postulates, bacteria were reisolated from the inoculated plant and fruit tissue and were identified as Pcb by PCR assay (Duarte et al. 2004). This is the first report of Pcb causing soft rot of squash and watermelon in Serbia. The origin of the pathogen remained unknown. It might have been present in Serbia for some time but misidentified in previous studies that could not discriminate this subspecies or recently introduced by infected seed.",
publisher = "American Phytopathological Society",
journal = "Plant Disease",
title = "First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia",
number = "10",
pages = "2667",
volume = "103",
doi = "10.1094/PDIS-12-18-2213-PDN"
}
Zlatković, N., Prokić, A., Gašić, K., Kuzmanović, N., Ivanović, M.,& Obradović, A.. (2019). First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia. in Plant Disease
American Phytopathological Society., 103(10), 2667.
https://doi.org/10.1094/PDIS-12-18-2213-PDN
Zlatković N, Prokić A, Gašić K, Kuzmanović N, Ivanović M, Obradović A. First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia. in Plant Disease. 2019;103(10):2667.
doi:10.1094/PDIS-12-18-2213-PDN .
Zlatković, Nevena, Prokić, Anđelka, Gašić, Katarina, Kuzmanović, Nemanja, Ivanović, Milan, Obradović, Aleksa, "First Report of Pectobacterium carotovorum subsp. brasiliense Causing Soft Rot on Squash and Watermelon in Serbia" in Plant Disease, 103, no. 10 (2019):2667,
https://doi.org/10.1094/PDIS-12-18-2213-PDN . .
1
12
2
9

Integration of biological and conventional treatments in control of pepper bacterial spot

Šević, Milan; Gašić, Katarina; Ignjatov, Maja; Mijatović, Mirjana; Prokić, Anđelka; Obradović, Aleksa

(Elsevier, 2019)

TY  - JOUR
AU  - Šević, Milan
AU  - Gašić, Katarina
AU  - Ignjatov, Maja
AU  - Mijatović, Mirjana
AU  - Prokić, Anđelka
AU  - Obradović, Aleksa
PY  - 2019
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/576
AB  - Bacterial spot caused by Xanthomonas euvesicatoria is one of the most devastating pepper diseases in Serbia. Questionable seed quality, climatic conditions, and frequent irrigation during summer favour the disease occurrence and spread. The available management practices do not provide adequate disease control. Therefore, development of alternative and more sustainable disease management strategies is needed. Integration of classical and biological treatments could be an effective, environmentally safe option for reducing pepper bacterial spot severity. In order to develop an efficient integrated disease management program, we studied efficacy of biocontrol agents (bacteriophage strain KФ1 and two strains of Bacillus subtilis AAac and QST 713), systemic acquired resistance (SAR) inducer (acibenzolar-S-methyl - ASM), a commercial microbial fertilizer (Slavol), copper based compounds (copper hydroxide and copper oxychloride) in combination with or without mancozeb, and antibiotics (streptomycin sulphate and kasugamycin). They were applied as single treatments in two separate field experiments. Based on the single treatment efficacy, various combinations of the treatments were chosen for further testing in three separate field experiments. Additionally, we evaluated potential negative effect of ASM on pepper growth and yield in the growth chamber experiment. All the tested single treatments significantly reduced disease severity compared to the inoculated control (IC), except microbiological fertilizer and the antagonistic strain AAac. Integration of copper hydroxide, ASM and bacteriophages was the most efficient treatment, reducing the disease intensity by 96–98%. The results indicated that this combination may be an adequate alternative program for control of pepper bacterial spot.
PB  - Elsevier
T2  - Crop Protection
T1  - Integration of biological and conventional treatments in control of pepper bacterial spot
EP  - 51
SP  - 46
VL  - 119
DO  - 10.1016/j.cropro.2019.01.006
ER  - 
@article{
author = "Šević, Milan and Gašić, Katarina and Ignjatov, Maja and Mijatović, Mirjana and Prokić, Anđelka and Obradović, Aleksa",
year = "2019",
abstract = "Bacterial spot caused by Xanthomonas euvesicatoria is one of the most devastating pepper diseases in Serbia. Questionable seed quality, climatic conditions, and frequent irrigation during summer favour the disease occurrence and spread. The available management practices do not provide adequate disease control. Therefore, development of alternative and more sustainable disease management strategies is needed. Integration of classical and biological treatments could be an effective, environmentally safe option for reducing pepper bacterial spot severity. In order to develop an efficient integrated disease management program, we studied efficacy of biocontrol agents (bacteriophage strain KФ1 and two strains of Bacillus subtilis AAac and QST 713), systemic acquired resistance (SAR) inducer (acibenzolar-S-methyl - ASM), a commercial microbial fertilizer (Slavol), copper based compounds (copper hydroxide and copper oxychloride) in combination with or without mancozeb, and antibiotics (streptomycin sulphate and kasugamycin). They were applied as single treatments in two separate field experiments. Based on the single treatment efficacy, various combinations of the treatments were chosen for further testing in three separate field experiments. Additionally, we evaluated potential negative effect of ASM on pepper growth and yield in the growth chamber experiment. All the tested single treatments significantly reduced disease severity compared to the inoculated control (IC), except microbiological fertilizer and the antagonistic strain AAac. Integration of copper hydroxide, ASM and bacteriophages was the most efficient treatment, reducing the disease intensity by 96–98%. The results indicated that this combination may be an adequate alternative program for control of pepper bacterial spot.",
publisher = "Elsevier",
journal = "Crop Protection",
title = "Integration of biological and conventional treatments in control of pepper bacterial spot",
pages = "51-46",
volume = "119",
doi = "10.1016/j.cropro.2019.01.006"
}
Šević, M., Gašić, K., Ignjatov, M., Mijatović, M., Prokić, A.,& Obradović, A.. (2019). Integration of biological and conventional treatments in control of pepper bacterial spot. in Crop Protection
Elsevier., 119, 46-51.
https://doi.org/10.1016/j.cropro.2019.01.006
Šević M, Gašić K, Ignjatov M, Mijatović M, Prokić A, Obradović A. Integration of biological and conventional treatments in control of pepper bacterial spot. in Crop Protection. 2019;119:46-51.
doi:10.1016/j.cropro.2019.01.006 .
Šević, Milan, Gašić, Katarina, Ignjatov, Maja, Mijatović, Mirjana, Prokić, Anđelka, Obradović, Aleksa, "Integration of biological and conventional treatments in control of pepper bacterial spot" in Crop Protection, 119 (2019):46-51,
https://doi.org/10.1016/j.cropro.2019.01.006 . .
18
5
14

Bacterial diseases of cucurbits

Zlatković, Nevena; Gašić, Katarina; Prokić, Andjelka; Obradović, Aleksa

(Univerzitet u Novom Sadu - Poljoprivredni fakultet - Departman za zaštitu bilja i životne sredine "dr Pavla Vukasovića", Novi Sad, 2019)

TY  - JOUR
AU  - Zlatković, Nevena
AU  - Gašić, Katarina
AU  - Prokić, Andjelka
AU  - Obradović, Aleksa
PY  - 2019
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/597
AB  - Production of cucurbits has a long tradition worldwide. Cucumber, watermelon and melon production is very important for many producers in some parts of Serbia. These crops are especially susceptible to phytopathogenic bacteria which can cause substantial losses in years with favorable weather conditions. In this paper major bacterial diseases of cucurbits are described, such as bacterial fruit blotch caused by Acidovorax citrulli, angular leaf spot caused by Pseudomonas syringae pv. lachrymans, bacterial spot caused by Xanthomonas campestris, bacterial wilt caused by Erwinia tracheiphila, cucurbit yellow wine disease caused by Serratia marcescens, bacterial leaf spot, caused by Pseudomonas syringae pv. syringae, inducing bacterial soft rot caused by Pectobacterium species.
AB  - Biljke familije Cucurbitaceae imaju dugu tradiciju proizvodnje širom sveta. U pojedinim krajevima Srbije, naročito severnim, proizvodnja krastavca, lubenice i dinje predstavlja primarno zanimanje mnogih poljoprivrednih gazdinstava. Pojava bakterioza u godinama sa uslovima koji pogoduju nastanku infekcije, može značajno ugroziti proizvodnju ovih biljaka. U ovom radu predstavljena su najznačajnija bakteriozna oboljenja biljaka familije Cucurbitaceae, među kojima su: bakteriozna mrljavost plodova lubenice, čiji je prouzrokovač Acidovorax citrulli, uglasta pegavost lišća krastavca, prouzrokovana bakterijom Pseudomonas syringae pv. lachrymans; bakteriozna uvelost krastavca prouzrokovana vrstom Erwinia tracheiphila; bakteriozna pegavost koju prouzrokuje Xanthomonas cucurbitae; potom žutilo vreža, čiji je prouzrokovač Serratia marcescens; zatim bakteriozna lisna pegavost prouzrokovana Pseudomonas syringae pv. syringae; kao i bakteriozna vlažna trulež prouzrokovana vrstama roda Pectobacterium.
PB  - Univerzitet u Novom Sadu - Poljoprivredni fakultet - Departman za zaštitu bilja i životne sredine "dr Pavla Vukasovića", Novi Sad
T2  - Biljni lekar
T1  - Bacterial diseases of cucurbits
T1  - Bakterioze tikava
EP  - 445
IS  - 6
SP  - 431
VL  - 47
ER  - 
@article{
author = "Zlatković, Nevena and Gašić, Katarina and Prokić, Andjelka and Obradović, Aleksa",
year = "2019",
abstract = "Production of cucurbits has a long tradition worldwide. Cucumber, watermelon and melon production is very important for many producers in some parts of Serbia. These crops are especially susceptible to phytopathogenic bacteria which can cause substantial losses in years with favorable weather conditions. In this paper major bacterial diseases of cucurbits are described, such as bacterial fruit blotch caused by Acidovorax citrulli, angular leaf spot caused by Pseudomonas syringae pv. lachrymans, bacterial spot caused by Xanthomonas campestris, bacterial wilt caused by Erwinia tracheiphila, cucurbit yellow wine disease caused by Serratia marcescens, bacterial leaf spot, caused by Pseudomonas syringae pv. syringae, inducing bacterial soft rot caused by Pectobacterium species., Biljke familije Cucurbitaceae imaju dugu tradiciju proizvodnje širom sveta. U pojedinim krajevima Srbije, naročito severnim, proizvodnja krastavca, lubenice i dinje predstavlja primarno zanimanje mnogih poljoprivrednih gazdinstava. Pojava bakterioza u godinama sa uslovima koji pogoduju nastanku infekcije, može značajno ugroziti proizvodnju ovih biljaka. U ovom radu predstavljena su najznačajnija bakteriozna oboljenja biljaka familije Cucurbitaceae, među kojima su: bakteriozna mrljavost plodova lubenice, čiji je prouzrokovač Acidovorax citrulli, uglasta pegavost lišća krastavca, prouzrokovana bakterijom Pseudomonas syringae pv. lachrymans; bakteriozna uvelost krastavca prouzrokovana vrstom Erwinia tracheiphila; bakteriozna pegavost koju prouzrokuje Xanthomonas cucurbitae; potom žutilo vreža, čiji je prouzrokovač Serratia marcescens; zatim bakteriozna lisna pegavost prouzrokovana Pseudomonas syringae pv. syringae; kao i bakteriozna vlažna trulež prouzrokovana vrstama roda Pectobacterium.",
publisher = "Univerzitet u Novom Sadu - Poljoprivredni fakultet - Departman za zaštitu bilja i životne sredine "dr Pavla Vukasovića", Novi Sad",
journal = "Biljni lekar",
title = "Bacterial diseases of cucurbits, Bakterioze tikava",
pages = "445-431",
number = "6",
volume = "47"
}
Zlatković, N., Gašić, K., Prokić, A.,& Obradović, A.. (2019). Bacterial diseases of cucurbits. in Biljni lekar
Univerzitet u Novom Sadu - Poljoprivredni fakultet - Departman za zaštitu bilja i životne sredine "dr Pavla Vukasovića", Novi Sad., 47(6), 431-445.
Zlatković N, Gašić K, Prokić A, Obradović A. Bacterial diseases of cucurbits. in Biljni lekar. 2019;47(6):431-445..
Zlatković, Nevena, Gašić, Katarina, Prokić, Andjelka, Obradović, Aleksa, "Bacterial diseases of cucurbits" in Biljni lekar, 47, no. 6 (2019):431-445.

Specificity and sensitivity of three pcr-based methods for detection of erwinia amylovora in pure culture and plant material

Ivanović, Milan; Kuzmanović, Nemanja; Gašić, Katarina; Prokić, Andjelka; Zlatković, Nevena; Obradović, Aleksa

(Društvo genetičara Srbije, Beograd, 2019)

TY  - JOUR
AU  - Ivanović, Milan
AU  - Kuzmanović, Nemanja
AU  - Gašić, Katarina
AU  - Prokić, Andjelka
AU  - Zlatković, Nevena
AU  - Obradović, Aleksa
PY  - 2019
UR  - http://aspace.agrif.bg.ac.rs/handle/123456789/5009
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/601
AB  - Three PCR methods, referred in this study as,conventional" "nested" and,chromosomal" PCR and suggested for routine detection of Erwinia amylovora in pure culture and plant material, were evaluated according to their specificity and sensitivity. Specificity of PCR methods was analyzed by using 42 strains of E. amylovora, originating from different locations and plant species, with diverse PFGE profiles, representing distant populations of the pathogen. Sensitivity of PCR protocols in pure culture was studied by using nine different concentrations of E. amylovora in sterile ultrapure water as a template in PCR reactions. In order to study inhibitory effect of plant DNA and other inhibitors on sensitivity of the three PCR methods bacterial dilutions were mixed with plant macerate of pear, apple and quince prior to the PCR reaction. In specificity assays, tested PCR protocols were able to detect all E. amylovora strains regardless of the host of the strain, its origin or PFGE group, indicating primer specificity. On the other hand, sensitivity among tested methods varied, depending on bacterial concentration and selected plant material used in the PCR. When working with pure cultures nested PCR showed the greatest sensitivity by detecting 1.9 bacterial cells per PCR reaction, followed by detection limit of 9.5 cells per PCR reaction with conventional PCR and 1.9.105 cells/PCR reaction with chromosomal PCR. In spiked samples plant inhibitors either did not affect or they decreased the sensitivity of the PCR reaction, depending on the protocol and/or type of plant macerate. In our experiments, inhibitors from pear and quince macerates did not affect sensitivity of nested PCR, while apple macerate reduced its sensitivity by a factor of 10. Conventional PCR protocol was able to detect 95 cells/PCR reaction in pear and apple macerate, but only 9.5.103 cells/PCR in quince macerate. Greatest decrease in sensitivity of the PCR method was observed in spiked samples with chromosomal PCR since bacterial DNA was not detected in each of the spiked samples. Our research shows that all three PCR protocols are specific for detection of E. amylovora, but nested PCR proved to be most sensitive when working with pure cultures and plant material.
PB  - Društvo genetičara Srbije, Beograd
T2  - Genetika
T1  - Specificity and sensitivity of three pcr-based methods for detection of erwinia amylovora in pure culture and plant material
EP  - 1052
IS  - 3
SP  - 1039
VL  - 51
DO  - 10.2298/GENSR1903039I
ER  - 
@article{
author = "Ivanović, Milan and Kuzmanović, Nemanja and Gašić, Katarina and Prokić, Andjelka and Zlatković, Nevena and Obradović, Aleksa",
year = "2019",
abstract = "Three PCR methods, referred in this study as,conventional" "nested" and,chromosomal" PCR and suggested for routine detection of Erwinia amylovora in pure culture and plant material, were evaluated according to their specificity and sensitivity. Specificity of PCR methods was analyzed by using 42 strains of E. amylovora, originating from different locations and plant species, with diverse PFGE profiles, representing distant populations of the pathogen. Sensitivity of PCR protocols in pure culture was studied by using nine different concentrations of E. amylovora in sterile ultrapure water as a template in PCR reactions. In order to study inhibitory effect of plant DNA and other inhibitors on sensitivity of the three PCR methods bacterial dilutions were mixed with plant macerate of pear, apple and quince prior to the PCR reaction. In specificity assays, tested PCR protocols were able to detect all E. amylovora strains regardless of the host of the strain, its origin or PFGE group, indicating primer specificity. On the other hand, sensitivity among tested methods varied, depending on bacterial concentration and selected plant material used in the PCR. When working with pure cultures nested PCR showed the greatest sensitivity by detecting 1.9 bacterial cells per PCR reaction, followed by detection limit of 9.5 cells per PCR reaction with conventional PCR and 1.9.105 cells/PCR reaction with chromosomal PCR. In spiked samples plant inhibitors either did not affect or they decreased the sensitivity of the PCR reaction, depending on the protocol and/or type of plant macerate. In our experiments, inhibitors from pear and quince macerates did not affect sensitivity of nested PCR, while apple macerate reduced its sensitivity by a factor of 10. Conventional PCR protocol was able to detect 95 cells/PCR reaction in pear and apple macerate, but only 9.5.103 cells/PCR in quince macerate. Greatest decrease in sensitivity of the PCR method was observed in spiked samples with chromosomal PCR since bacterial DNA was not detected in each of the spiked samples. Our research shows that all three PCR protocols are specific for detection of E. amylovora, but nested PCR proved to be most sensitive when working with pure cultures and plant material.",
publisher = "Društvo genetičara Srbije, Beograd",
journal = "Genetika",
title = "Specificity and sensitivity of three pcr-based methods for detection of erwinia amylovora in pure culture and plant material",
pages = "1052-1039",
number = "3",
volume = "51",
doi = "10.2298/GENSR1903039I"
}
Ivanović, M., Kuzmanović, N., Gašić, K., Prokić, A., Zlatković, N.,& Obradović, A.. (2019). Specificity and sensitivity of three pcr-based methods for detection of erwinia amylovora in pure culture and plant material. in Genetika
Društvo genetičara Srbije, Beograd., 51(3), 1039-1052.
https://doi.org/10.2298/GENSR1903039I
Ivanović M, Kuzmanović N, Gašić K, Prokić A, Zlatković N, Obradović A. Specificity and sensitivity of three pcr-based methods for detection of erwinia amylovora in pure culture and plant material. in Genetika. 2019;51(3):1039-1052.
doi:10.2298/GENSR1903039I .
Ivanović, Milan, Kuzmanović, Nemanja, Gašić, Katarina, Prokić, Andjelka, Zlatković, Nevena, Obradović, Aleksa, "Specificity and sensitivity of three pcr-based methods for detection of erwinia amylovora in pure culture and plant material" in Genetika, 51, no. 3 (2019):1039-1052,
https://doi.org/10.2298/GENSR1903039I . .
3
2

Characterization and population diversity of Erwinia amylovora strains originating from pome fruits in Serbia

Krivokapić, Marija; Gavrilović, Veljko; Ivanović, Milan; Kuzmanović, Nemanja; Fira, Đorđe; Obradović, Aleksa; Gašić, Katarina

(Institute of Pesticides and Environmental Protection, 2018)

TY  - JOUR
AU  - Krivokapić, Marija
AU  - Gavrilović, Veljko
AU  - Ivanović, Milan
AU  - Kuzmanović, Nemanja
AU  - Fira, Đorđe
AU  - Obradović, Aleksa
AU  - Gašić, Katarina
PY  - 2018
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/545
AB  - The diversity of 30 Erwinia amylovora strains, isolated from quince, pear and apple trees on 14 localities in Serbia, was studied using bacteriological and molecular methods. In pathogenicity tests, all strains caused necrosis and oozing of bacterial exudate on inoculated immature pear, cherry and plum fruits, and induced hypersensitive reaction in tobacco leaves. The studied strains were Gram and oxidase negative, non-fluorescent, levan and catalase positive and facultatively anaerobic. The strains did not reduce nitrates, but utilized citrate and produced acid from sorbitol, hydrolyzed gelatine, produced reducing substances from sucrose and grew in the presence of 5% NaCl, but not at 36oC. Identity of the strains was confirmed by conventional and nested PCR methods. Rep-PCR with REP, ERIC and BOX primers resulted in amplification of several DNA fragments respectively, but showed no variation within the strains. However, different genetic profiles were obtained with RAPD-PCR by using six primers which enabled differentiation of the strains into four groups. Genetic differences between the studied strains did not correlate with the host plants, geographical origin or year of isolation.
AB  - Primenom standardnih bakterioloških i molekularnih metoda proučen je diverzitet 30 sojeva Erwinia amylovora izolovanih iz dunje, kruške i jabuke, poreklom iz 14 lokaliteta u Srbiji. Svi proučavani sojevi izazvali su nekrozu i pojavu bakterijskog eksudata na nesazrelim plodovima kruške, trešnje i šljive, kao i hipersenzitivnu reakciju duvana. Proučavani sojevi bili su Gram i oksidaza negativni, fakultativno anaerobni, levan i katalaza pozitivni i nisu stvarali fluorescentni pigment na Kingovoj podlozi B. Svi sojevi hidrolizuju želatin, koriste citrate i stvaraju kiselinu iz sorbitola, proizvode redukujuće supstance iz saharoze, ne redukuju nitrate, razvijaju se u prisustvu 5% NaCl, ali ne i pri 36°C. Identitet sojeva potvrđen je konvencionalnim PCR i nested PCR metodama. Rep-PCR metodom korišćenjem REP, ERIC i BOX prajmera umnoženo je više fragmenata DNK čiji broj i veličina su se podudarali kod svih proučavanih sojeva. Za razliku od Rep-PCR, primenom RAPD-PCR metode uz korišćenje šest prajmera došlo je do izdvajanja različitih genetičkih profila i diferencijacije sojeva u četiri grupe. Genetičke razlike među proučavanim sojevima nisu bile u korelaciji sa domaćinima iz kojih su izolovani, niti sa njihovim geografskim poreklom i godinom izolacije.
PB  - Institute of Pesticides and Environmental Protection
T2  - Pesticidi i fitomedicina
T1  - Characterization and population diversity of Erwinia amylovora strains originating from pome fruits in Serbia
T1  - Karakterizacija i diverzitet populacije sojeva Erwinia amylovora poreklom iz jabučastih voćaka gajenih u Srbiji
EP  - 184
IS  - 3-4
SP  - 175
VL  - 33
DO  - 10.2298/PIF1804175K
ER  - 
@article{
author = "Krivokapić, Marija and Gavrilović, Veljko and Ivanović, Milan and Kuzmanović, Nemanja and Fira, Đorđe and Obradović, Aleksa and Gašić, Katarina",
year = "2018",
abstract = "The diversity of 30 Erwinia amylovora strains, isolated from quince, pear and apple trees on 14 localities in Serbia, was studied using bacteriological and molecular methods. In pathogenicity tests, all strains caused necrosis and oozing of bacterial exudate on inoculated immature pear, cherry and plum fruits, and induced hypersensitive reaction in tobacco leaves. The studied strains were Gram and oxidase negative, non-fluorescent, levan and catalase positive and facultatively anaerobic. The strains did not reduce nitrates, but utilized citrate and produced acid from sorbitol, hydrolyzed gelatine, produced reducing substances from sucrose and grew in the presence of 5% NaCl, but not at 36oC. Identity of the strains was confirmed by conventional and nested PCR methods. Rep-PCR with REP, ERIC and BOX primers resulted in amplification of several DNA fragments respectively, but showed no variation within the strains. However, different genetic profiles were obtained with RAPD-PCR by using six primers which enabled differentiation of the strains into four groups. Genetic differences between the studied strains did not correlate with the host plants, geographical origin or year of isolation., Primenom standardnih bakterioloških i molekularnih metoda proučen je diverzitet 30 sojeva Erwinia amylovora izolovanih iz dunje, kruške i jabuke, poreklom iz 14 lokaliteta u Srbiji. Svi proučavani sojevi izazvali su nekrozu i pojavu bakterijskog eksudata na nesazrelim plodovima kruške, trešnje i šljive, kao i hipersenzitivnu reakciju duvana. Proučavani sojevi bili su Gram i oksidaza negativni, fakultativno anaerobni, levan i katalaza pozitivni i nisu stvarali fluorescentni pigment na Kingovoj podlozi B. Svi sojevi hidrolizuju želatin, koriste citrate i stvaraju kiselinu iz sorbitola, proizvode redukujuće supstance iz saharoze, ne redukuju nitrate, razvijaju se u prisustvu 5% NaCl, ali ne i pri 36°C. Identitet sojeva potvrđen je konvencionalnim PCR i nested PCR metodama. Rep-PCR metodom korišćenjem REP, ERIC i BOX prajmera umnoženo je više fragmenata DNK čiji broj i veličina su se podudarali kod svih proučavanih sojeva. Za razliku od Rep-PCR, primenom RAPD-PCR metode uz korišćenje šest prajmera došlo je do izdvajanja različitih genetičkih profila i diferencijacije sojeva u četiri grupe. Genetičke razlike među proučavanim sojevima nisu bile u korelaciji sa domaćinima iz kojih su izolovani, niti sa njihovim geografskim poreklom i godinom izolacije.",
publisher = "Institute of Pesticides and Environmental Protection",
journal = "Pesticidi i fitomedicina",
title = "Characterization and population diversity of Erwinia amylovora strains originating from pome fruits in Serbia, Karakterizacija i diverzitet populacije sojeva Erwinia amylovora poreklom iz jabučastih voćaka gajenih u Srbiji",
pages = "184-175",
number = "3-4",
volume = "33",
doi = "10.2298/PIF1804175K"
}
Krivokapić, M., Gavrilović, V., Ivanović, M., Kuzmanović, N., Fira, Đ., Obradović, A.,& Gašić, K.. (2018). Characterization and population diversity of Erwinia amylovora strains originating from pome fruits in Serbia. in Pesticidi i fitomedicina
Institute of Pesticides and Environmental Protection., 33(3-4), 175-184.
https://doi.org/10.2298/PIF1804175K
Krivokapić M, Gavrilović V, Ivanović M, Kuzmanović N, Fira Đ, Obradović A, Gašić K. Characterization and population diversity of Erwinia amylovora strains originating from pome fruits in Serbia. in Pesticidi i fitomedicina. 2018;33(3-4):175-184.
doi:10.2298/PIF1804175K .
Krivokapić, Marija, Gavrilović, Veljko, Ivanović, Milan, Kuzmanović, Nemanja, Fira, Đorđe, Obradović, Aleksa, Gašić, Katarina, "Characterization and population diversity of Erwinia amylovora strains originating from pome fruits in Serbia" in Pesticidi i fitomedicina, 33, no. 3-4 (2018):175-184,
https://doi.org/10.2298/PIF1804175K . .
2

Complete Genome of the Xanthomonas euvesicatoria Specific Bacteriophage K Phi 1, Its Survival and Potential in Control of Pepper Bacterial Spot

Gašić, Katarina; Kuzmanović, Nemanja; Ivanović, Milan; Prokić, Anđelka; Šević, Milan; Obradović, Aleksa

(Frontiers Media S.A., 2018)

TY  - JOUR
AU  - Gašić, Katarina
AU  - Kuzmanović, Nemanja
AU  - Ivanović, Milan
AU  - Prokić, Anđelka
AU  - Šević, Milan
AU  - Obradović, Aleksa
PY  - 2018
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/508
AB  - Xanthomonas euvesicatoria phage K Phi 1, a member of Myoviridae family, was isolated from the rhizosphere of pepper plants showing symptoms of bacterial spot. The phage strain expressed antibacterial activity to all X. euvesicatoria strains tested and did not lyse other Xanthomonas spp., nor other less related bacterial species. The genome of K Phi D1 is double-stranded DNA of 46.077 bp including 66 open reading frames and an average GC content of 62.9%, representing the first complete genome sequence published for a phage infecting xanthomonads associated with pepper or tomato. The highest genome similarity was observed between phage K Phi 1 and the Xanthomonas oryzae pv. oryzae specific phage OP2. On the other hand, when compared with other members of the genus Bcep78virus, the genome similarity was lower. Forty-four (67%) predicted K Phi 1 proteins shared homology with Xanthomonas phage OP2, while 20 genes (30%) were unique to K Phi 1. Phage K Phi 1, which is chloroform resistant and stable in different media and in the pH range 5-11, showed a high titer storage ability for at least 2 years at +4 degrees C. Copper-hydroxide and copper-oxychloride reduced phage activity proportionally to the used concentrations and the exposure time. UV light was detrimental to the phage strain, but skim milk plus sucrose formulation extended its survival in vitro. The phages survived for at least 7 days on the surface of pepper leaves in the greenhouse, showing the ability to persist on the plant tissue without the presence of the host bacterium. Results of three repeated experiments showed that foliar applications of the unformulated K Phi 1 phage suspension effectively controlled pepper bacterial spot compared to the standard treatment and the untreated control. The integration of the phage K Phi 1 and copper-hydroxide treatments resulted in an increased efficacy compared to the copper-hydroxide alone.
PB  - Frontiers Media S.A.
T2  - Frontiers In Microbiology
T1  - Complete Genome of the Xanthomonas euvesicatoria Specific Bacteriophage K Phi 1, Its Survival and Potential in Control of Pepper Bacterial Spot
VL  - 9
DO  - 10.3389/fmicb.2018.02021
ER  - 
@article{
author = "Gašić, Katarina and Kuzmanović, Nemanja and Ivanović, Milan and Prokić, Anđelka and Šević, Milan and Obradović, Aleksa",
year = "2018",
abstract = "Xanthomonas euvesicatoria phage K Phi 1, a member of Myoviridae family, was isolated from the rhizosphere of pepper plants showing symptoms of bacterial spot. The phage strain expressed antibacterial activity to all X. euvesicatoria strains tested and did not lyse other Xanthomonas spp., nor other less related bacterial species. The genome of K Phi D1 is double-stranded DNA of 46.077 bp including 66 open reading frames and an average GC content of 62.9%, representing the first complete genome sequence published for a phage infecting xanthomonads associated with pepper or tomato. The highest genome similarity was observed between phage K Phi 1 and the Xanthomonas oryzae pv. oryzae specific phage OP2. On the other hand, when compared with other members of the genus Bcep78virus, the genome similarity was lower. Forty-four (67%) predicted K Phi 1 proteins shared homology with Xanthomonas phage OP2, while 20 genes (30%) were unique to K Phi 1. Phage K Phi 1, which is chloroform resistant and stable in different media and in the pH range 5-11, showed a high titer storage ability for at least 2 years at +4 degrees C. Copper-hydroxide and copper-oxychloride reduced phage activity proportionally to the used concentrations and the exposure time. UV light was detrimental to the phage strain, but skim milk plus sucrose formulation extended its survival in vitro. The phages survived for at least 7 days on the surface of pepper leaves in the greenhouse, showing the ability to persist on the plant tissue without the presence of the host bacterium. Results of three repeated experiments showed that foliar applications of the unformulated K Phi 1 phage suspension effectively controlled pepper bacterial spot compared to the standard treatment and the untreated control. The integration of the phage K Phi 1 and copper-hydroxide treatments resulted in an increased efficacy compared to the copper-hydroxide alone.",
publisher = "Frontiers Media S.A.",
journal = "Frontiers In Microbiology",
title = "Complete Genome of the Xanthomonas euvesicatoria Specific Bacteriophage K Phi 1, Its Survival and Potential in Control of Pepper Bacterial Spot",
volume = "9",
doi = "10.3389/fmicb.2018.02021"
}
Gašić, K., Kuzmanović, N., Ivanović, M., Prokić, A., Šević, M.,& Obradović, A.. (2018). Complete Genome of the Xanthomonas euvesicatoria Specific Bacteriophage K Phi 1, Its Survival and Potential in Control of Pepper Bacterial Spot. in Frontiers In Microbiology
Frontiers Media S.A.., 9.
https://doi.org/10.3389/fmicb.2018.02021
Gašić K, Kuzmanović N, Ivanović M, Prokić A, Šević M, Obradović A. Complete Genome of the Xanthomonas euvesicatoria Specific Bacteriophage K Phi 1, Its Survival and Potential in Control of Pepper Bacterial Spot. in Frontiers In Microbiology. 2018;9.
doi:10.3389/fmicb.2018.02021 .
Gašić, Katarina, Kuzmanović, Nemanja, Ivanović, Milan, Prokić, Anđelka, Šević, Milan, Obradović, Aleksa, "Complete Genome of the Xanthomonas euvesicatoria Specific Bacteriophage K Phi 1, Its Survival and Potential in Control of Pepper Bacterial Spot" in Frontiers In Microbiology, 9 (2018),
https://doi.org/10.3389/fmicb.2018.02021 . .
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18
34

Biocontrol potential of bacteriophage K Phi 1 in control of pepper bacterial spot

Gašić, Katarina; Kuzmanović, Nemanja; Prokić, Anđelka; Ivanović, M.; Zlatković, Nevena; Obradović, Aleksa

(Amer Phytopathological Soc, St Paul, 2018)

TY  - CONF
AU  - Gašić, Katarina
AU  - Kuzmanović, Nemanja
AU  - Prokić, Anđelka
AU  - Ivanović, M.
AU  - Zlatković, Nevena
AU  - Obradović, Aleksa
PY  - 2018
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/522
PB  - Amer Phytopathological Soc, St Paul
C3  - Phytopathology
T1  - Biocontrol potential of bacteriophage K Phi 1 in control of pepper bacterial spot
EP  - 133
IS  - 10
SP  - 132
VL  - 108
ER  - 
@conference{
author = "Gašić, Katarina and Kuzmanović, Nemanja and Prokić, Anđelka and Ivanović, M. and Zlatković, Nevena and Obradović, Aleksa",
year = "2018",
publisher = "Amer Phytopathological Soc, St Paul",
journal = "Phytopathology",
title = "Biocontrol potential of bacteriophage K Phi 1 in control of pepper bacterial spot",
pages = "133-132",
number = "10",
volume = "108"
}
Gašić, K., Kuzmanović, N., Prokić, A., Ivanović, M., Zlatković, N.,& Obradović, A.. (2018). Biocontrol potential of bacteriophage K Phi 1 in control of pepper bacterial spot. in Phytopathology
Amer Phytopathological Soc, St Paul., 108(10), 132-133.
Gašić K, Kuzmanović N, Prokić A, Ivanović M, Zlatković N, Obradović A. Biocontrol potential of bacteriophage K Phi 1 in control of pepper bacterial spot. in Phytopathology. 2018;108(10):132-133..
Gašić, Katarina, Kuzmanović, Nemanja, Prokić, Anđelka, Ivanović, M., Zlatković, Nevena, Obradović, Aleksa, "Biocontrol potential of bacteriophage K Phi 1 in control of pepper bacterial spot" in Phytopathology, 108, no. 10 (2018):132-133.