TY  - CONF
AU  - Banović Đeri, Bojana
AU  - Vidanović, Dejan
AU  - Tešović, Bojana
AU  - Petrović, Tamaš
AU  - Ristić, Danijela
AU  - Vučurović, Ivan
AU  - Dudić, Dragana
PY  - 2021
UR  - https://plantarum.izbis.bg.ac.rs/handle/123456789/978
AB  - Birbica, Faculty of Sciences, Departmologia Seent of Biology and Ecology

Positively oriented single stranded RNA viruses [ssRNA(+)] persistently affect health and well-being of all eukaryotes, including plants, animals and humans (i.e. SARS-CoV-2, yellow fever, hepatitis C, zika, West Nile, pepper mild mottle virus, etc.). How come these viruses are so wide spread and hard to eradicate? Besides their high changeability, another major reason is their ability to mimic host processes upon entering the host. Only recently it was revealed that ssRNA(+) viruses undergo methylation inside the host in the process that is similar to the methylation of the hosts’ own mRNAs. Such process may enable or disable virus to avoid some of the host’s defense mechanisms, but it inevitably impacts viral stability and fitness. Studies on this topic have only started, opening even more questions, with major ones being: how ssRNA(+) methylation, that occurs in the host, impacts viral pathogenicity and are these methylation patterns different in different hosts and for different ssRNA(+) viruses or do these viral methylomes share more universal pattern in concordance with their similar genome organization? Among numerous different methylation patterns of RNA, this research focused on N6-methyladenosine (m6A), as the most common and abundant methylation in eukaryotes, which was confirmed to be present in ssRNA(+) viruses as well. This study searched for patterns in the primary sequences and secondary structures of ssRNA(+) that are associated to m6A methylation sites relying on the experimentally obtained m6A datasets for eukaryotes and eukaryotic ssRNA(+) viruses. The results are discussed in view of datasets characteristics and study approach.
PB  - Birbica, Faculty of Sciences, Departmologia Seent of Biology and Ecology
C3  - Biologia Serbica, Book of Abstracts, Belgrade BioInformatics Conference 2021 21-25 June 2021, Vinča, Serbia
T1  - Bioinformatics analysis of eukaryotic positively oriented single stranded RNA viruses
SP  - 29
ER  - 

@conference{
author = "Banović Đeri, Bojana and Vidanović, Dejan and Tešović, Bojana and Petrović, Tamaš and Ristić, Danijela and Vučurović, Ivan and Dudić, Dragana",
year = "2021",
abstract = "Birbica, Faculty of Sciences, Departmologia Seent of Biology and Ecology

Positively oriented single stranded RNA viruses [ssRNA(+)] persistently affect health and well-being of all eukaryotes, including plants, animals and humans (i.e. SARS-CoV-2, yellow fever, hepatitis C, zika, West Nile, pepper mild mottle virus, etc.). How come these viruses are so wide spread and hard to eradicate? Besides their high changeability, another major reason is their ability to mimic host processes upon entering the host. Only recently it was revealed that ssRNA(+) viruses undergo methylation inside the host in the process that is similar to the methylation of the hosts’ own mRNAs. Such process may enable or disable virus to avoid some of the host’s defense mechanisms, but it inevitably impacts viral stability and fitness. Studies on this topic have only started, opening even more questions, with major ones being: how ssRNA(+) methylation, that occurs in the host, impacts viral pathogenicity and are these methylation patterns different in different hosts and for different ssRNA(+) viruses or do these viral methylomes share more universal pattern in concordance with their similar genome organization? Among numerous different methylation patterns of RNA, this research focused on N6-methyladenosine (m6A), as the most common and abundant methylation in eukaryotes, which was confirmed to be present in ssRNA(+) viruses as well. This study searched for patterns in the primary sequences and secondary structures of ssRNA(+) that are associated to m6A methylation sites relying on the experimentally obtained m6A datasets for eukaryotes and eukaryotic ssRNA(+) viruses. The results are discussed in view of datasets characteristics and study approach.",
publisher = "Birbica, Faculty of Sciences, Departmologia Seent of Biology and Ecology",
journal = "Biologia Serbica, Book of Abstracts, Belgrade BioInformatics Conference 2021 21-25 June 2021, Vinča, Serbia",
title = "Bioinformatics analysis of eukaryotic positively oriented single stranded RNA viruses",
pages = "29"
}

Banović Đeri, B., Vidanović, D., Tešović, B., Petrović, T., Ristić, D., Vučurović, I.,& Dudić, D.. (2021). Bioinformatics analysis of eukaryotic positively oriented single stranded RNA viruses. in Biologia Serbica, Book of Abstracts, Belgrade BioInformatics Conference 2021 21-25 June 2021, Vinča, Serbia
Birbica, Faculty of Sciences, Departmologia Seent of Biology and Ecology., 29.

Banović Đeri B, Vidanović D, Tešović B, Petrović T, Ristić D, Vučurović I, Dudić D. Bioinformatics analysis of eukaryotic positively oriented single stranded RNA viruses. in Biologia Serbica, Book of Abstracts, Belgrade BioInformatics Conference 2021 21-25 June 2021, Vinča, Serbia. 2021;:29..

Banović Đeri, Bojana, Vidanović, Dejan, Tešović, Bojana, Petrović, Tamaš, Ristić, Danijela, Vučurović, Ivan, Dudić, Dragana, "Bioinformatics analysis of eukaryotic positively oriented single stranded RNA viruses" in Biologia Serbica, Book of Abstracts, Belgrade BioInformatics Conference 2021 21-25 June 2021, Vinča, Serbia (2021):29.