Mitochondrial COI in phylogenetic relationships of Laimaphelenchus belgradiensis (nematoda: Aphelenchoididae)
Abstract
Nematodes of the genus Laimaphelenchus are small and tiny organisms. Some parts of their body are measured in nanometers. The identification and classification of such organisms is a complex task. Previously, the major source of classification was morphology based on anatomical characters and measurements. Nowadays, this approach is supplemented by: "nano-morphology" based on scanning electron microscopy and molecular data and phylogeny, resulting in molecular systematics. Laimaphelenchus belgradiensis was recently described species. Since cytochrome c oxidase subunit I gene was successful in DNA based species diagnosis, it was chosen as a molecular marker to infer phylogeny of the newly discovered species. Phylogenetic relationships were based on Bayesian inference, the pairwise distances and the content of nitrogenous bases. The great genetic diversity was observed among close and distant species.
Keywords:
Laimaphelenchus belgradiensis / mCOI / phylogenySource:
Genetika-Belgrade, 2015, 47, 3, 909-916Publisher:
- Serbian Genetics Society
Funding / projects:
- Development of integrated approach in plant protection for control harmful organisms (RS-31018)
- New indigenous bacterial isolates Lysobacter and Pseudomonas as an important source of metabolites useful for biotechnology, plant growth stimulation and disease control: from isolates to inoculants (RS-46007)
DOI: 10.2298/GENSR1503909O
ISSN: 0534-0012
WoS: 000369703300013
Scopus: 2-s2.0-84957068499
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Institution/Community
IZBISTY - JOUR AU - Oro, Violeta AU - Milovanović, Nenad AU - Petrović, Violeta AU - Nikolić, Bogdan AU - Blagojević, Jovana PY - 2015 UR - https://plantarum.izbis.bg.ac.rs/handle/123456789/402 AB - Nematodes of the genus Laimaphelenchus are small and tiny organisms. Some parts of their body are measured in nanometers. The identification and classification of such organisms is a complex task. Previously, the major source of classification was morphology based on anatomical characters and measurements. Nowadays, this approach is supplemented by: "nano-morphology" based on scanning electron microscopy and molecular data and phylogeny, resulting in molecular systematics. Laimaphelenchus belgradiensis was recently described species. Since cytochrome c oxidase subunit I gene was successful in DNA based species diagnosis, it was chosen as a molecular marker to infer phylogeny of the newly discovered species. Phylogenetic relationships were based on Bayesian inference, the pairwise distances and the content of nitrogenous bases. The great genetic diversity was observed among close and distant species. PB - Serbian Genetics Society T2 - Genetika-Belgrade T1 - Mitochondrial COI in phylogenetic relationships of Laimaphelenchus belgradiensis (nematoda: Aphelenchoididae) EP - 916 IS - 3 SP - 909 VL - 47 DO - 10.2298/GENSR1503909O ER -
@article{ author = "Oro, Violeta and Milovanović, Nenad and Petrović, Violeta and Nikolić, Bogdan and Blagojević, Jovana", year = "2015", abstract = "Nematodes of the genus Laimaphelenchus are small and tiny organisms. Some parts of their body are measured in nanometers. The identification and classification of such organisms is a complex task. Previously, the major source of classification was morphology based on anatomical characters and measurements. Nowadays, this approach is supplemented by: "nano-morphology" based on scanning electron microscopy and molecular data and phylogeny, resulting in molecular systematics. Laimaphelenchus belgradiensis was recently described species. Since cytochrome c oxidase subunit I gene was successful in DNA based species diagnosis, it was chosen as a molecular marker to infer phylogeny of the newly discovered species. Phylogenetic relationships were based on Bayesian inference, the pairwise distances and the content of nitrogenous bases. The great genetic diversity was observed among close and distant species.", publisher = "Serbian Genetics Society", journal = "Genetika-Belgrade", title = "Mitochondrial COI in phylogenetic relationships of Laimaphelenchus belgradiensis (nematoda: Aphelenchoididae)", pages = "916-909", number = "3", volume = "47", doi = "10.2298/GENSR1503909O" }
Oro, V., Milovanović, N., Petrović, V., Nikolić, B.,& Blagojević, J.. (2015). Mitochondrial COI in phylogenetic relationships of Laimaphelenchus belgradiensis (nematoda: Aphelenchoididae). in Genetika-Belgrade Serbian Genetics Society., 47(3), 909-916. https://doi.org/10.2298/GENSR1503909O
Oro V, Milovanović N, Petrović V, Nikolić B, Blagojević J. Mitochondrial COI in phylogenetic relationships of Laimaphelenchus belgradiensis (nematoda: Aphelenchoididae). in Genetika-Belgrade. 2015;47(3):909-916. doi:10.2298/GENSR1503909O .
Oro, Violeta, Milovanović, Nenad, Petrović, Violeta, Nikolić, Bogdan, Blagojević, Jovana, "Mitochondrial COI in phylogenetic relationships of Laimaphelenchus belgradiensis (nematoda: Aphelenchoididae)" in Genetika-Belgrade, 47, no. 3 (2015):909-916, https://doi.org/10.2298/GENSR1503909O . .